Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1426 ATGAGTATCTCTGTGAATGGACAGTCTCAGGTCCCTCCTGGCTTCAGGTTCCACCCCACTGAAGAAGAGCTTTTGCAGTACTACTTGAGGAAGAAGGTTTCCTATGAGAAGATTGACCTCGATGTTATTCGCGACGTCGATCTCAACAAGCTCGAGCCCTGGGATATACAGGAGAAGTGCAAGATAGGAACCACCCCACAAAACGACTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCCACCGGCACCCGGACCAACCGCGCCACGGCCGCCGGATTCTGGAAGGCCACCGGCCGGGACAAGGTCATATACAGCAACGGCAACAGGATCGGAATGAGGAAGACCCTGGTCTTCTACAAAGGCCGTGCTCCTCATGGCCAAAAATCCGATTGGATCATGCACGAATACAGACTAGATGATAACACCAACGACACCAATATTGTGACGAATGTGATGGGAGATGGAGGCCAAGAAGAGGGTTGGGTGGTATGCCGAATATTCAAGAAGAAGAACCATCTGAAAACCCTAGAAAGCCCTTTGGCTTCGTCCATTATTACCGGAGAAAGCACCAGAAGGGGCCACGTGTTCGATTCCTGCGACGAGGAGGGGGCTTTAGAGCAGATACTGCAGCAAATGGGAAGAAGCTGCAAGGAAGAGAACGAAGGAAATTATAGCAATAATAATGGAAGATTCGCTATTTCCAGCTTCAACAATGGTGGTCATAACAATAACTACCATGAAAGGTTCCTGAAGCTCCCAAGTCTAGAAAGCCCAAAATCGACAAGCTTAGAGAATAATAATAATAATAATGGGTACCACCCCATTATTCCCGAGATGGAAGGCTCATTTTCGACAGTTCATCAAATGGAGGCATCCAACGGTGGTGGACTTGCCAACTGGGCGGCTCTGGATCGGCTCGTGGCTTCGCAGCTGAACGGCCAGACCGAGGCTTCTAGGCAGCTAGCCTGCTTCAACGACCCCACCAGCAGCACCATGATGGGTTACTGCACAAACGACGTCGTTCACGATCTGCAATTGCCAACCCTACGATCCTCCTCGTCATCGACGTCCACGTCCACCCACAGGGCTGCGTACGTGAGTCCGGCCGCACAGGATTACAGCACCAGCGAAATTGACCTCTGGAGCTTTGCCAGATCAGCGTCGTCTTTGTTGTCGTCTTCGTCCTCTGAGCCGCTATGCCACGTGTCGAACACATCAGTGTAA 1227 0.5102 MSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGNRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTNDTNIVTNVMGDGGQEEGWVVCRIFKKKNHLKTLESPLASSIITGESTRRGHVFDSCDEEGALEQILQQMGRSCKEENEGNYSNNNGRFAISSFNNGGHNNNYHERFLKLPSLESPKSTSLENNNNNNGYHPIIPEMEGSFSTVHQMEASNGGGLANWAALDRLVASQLNGQTEASRQLACFNDPTSSTMMGYCTNDVVHDLQLPTLRSSSSSTSTSTHRAAYVSPAAQDYSTSEIDLWSFARSASSLLSSSSSEPLCHVSNTSV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1426 408 FunFam NAC domain-containing protein 20 174 - -
Bisa06g1426 408 ProSiteProfiles NAC domain profile. 11 170 IPR003441 GO:0003677|GO:0006355
Bisa06g1426 408 Gene3D NAC domain 20 175 IPR036093 GO:0003677|GO:0006355
Bisa06g1426 408 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 266 - -
Bisa06g1426 408 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Bisa06g1426 408 SUPERFAMILY NAC domain 7 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1426 Bisa-ChrBisa06 49928182 49929666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1426 1 407 NAC Transcription Factor Family AT2G46770 54.916 2.18e-140 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa06g1426 NAM 4.6e-36 No_clan