Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1417 ATGTGTAATGGCCACGGAACGGAAAATATTCTAGGATTTCACCCTCATTCCATTTTTGAGCTCCACAACTTTCACGAACGGGAGAGCCCCACTTGGGAAATTCAGAGCTTGAAAGCAGAGATGAGCGCGAAGACCCAGAAGGCTCGGACCCGTGTGGGGAAATACGAGCTGGGAAGAACCATTGGCGAGGGTACCTTCGCGAAGGTCAAGATCGCGAGAAACGTCGAGACCAGGGAAAGCTTCGCCATCAAAATCCTCGACCGTAACCATGTGCTCCAGCACAGCATGACGGAACAGCTTAAGAGAGAAATTTCAGCCATGAAGCTGATCAGACATCCCAATGTCGTTCAAATATATGAGGTGATGGCAAGTAAATCAAAGATTTACATTGTCCTGGAGTTGGTTGATGGGGGAGAACTATTTGACAAAATAGCTCATAATGGAAGACTCAAGGAGGATGAAGCAAGGCGATATTTTCAACAACTTGTTAACGCTGTTGATTACTGCCATAGTAGAGGCGTCTTTCACAGAGATTTGAAGCCCGAGAATCTTGTTCTGGACAGAAATGGTGTTCTTAAAGTTTCAGATTTTGGGCTGAGTACATACGCACAGCAAGATGATACTCTGCTACACACTGCTTGTGGAACCCCGAATTATGTTGCCCCTGAGGTGCTTAAAGCTAAAGGTTATGACGGCTCGGCATCTGATATCTGGTCATGTGGGGTCATTCTCTTTGTTCTGATGGCTGGGTATTTGCCTTTTGATGAGCCAAATCAGATGGTTTTGTACAAGAAAATTGGCAAGGCTGAATTCTCATTCCCATCATGGTTTCCACAAGATGCAAGGAAACTGCTGAAGCGTATTCTTGATCCAAACCCTCTTACTAGGATAAAAATGCCTGAACTCTTAGAAGATCGATGGTTCAAGGAAGGATACAAGCCAGCGTCTTTTGAAGAGGAAGAGGGTATAAATTTAGATGATGTAGCTGCTGCTTTCAATGGTAGTAAGGAAAATCTTGTGACAGAAAGGAAAGAGAAGCCTGTCTCCATGAATGCTTTTGAGCTCATTTCTAGGTCACAGAGTTTCAATCTTAACAACTTGTTTGAGAAGGAGATGGGTCTTGTCAAGCGAGAAACACGATTTACTTCACAGTGCCCTCCACATGAAATTATGACTAAAATTGAGGAAGCTGCGAGGCCATTGGGATTTAATGTTGACAAGCGAAACTATAAGATGAGGCTTAAAGGTGACAAAAGCGGAAGGAAGGGCTACCTCTCTGTGGCTACTGAGTCTCTTCCAATTTATTTGGTTCAGTTTTCGAAGTGGCTCCTTCCTTACACATGGTGGAGCTGCGGAAGACGGGGGGTGACACGCTGGAGTTTCACAAGTTCTACAAAAACTTTTCATCAGGTTTGCAAGACGTAG 1425 0.4449 MCNGHGTENILGFHPHSIFELHNFHERESPTWEIQSLKAEMSAKTQKARTRVGKYELGRTIGEGTFAKVKIARNVETRESFAIKILDRNHVLQHSMTEQLKREISAMKLIRHPNVVQIYEVMASKSKIYIVLELVDGGELFDKIAHNGRLKEDEARRYFQQLVNAVDYCHSRGVFHRDLKPENLVLDRNGVLKVSDFGLSTYAQQDDTLLHTACGTPNYVAPEVLKAKGYDGSASDIWSCGVILFVLMAGYLPFDEPNQMVLYKKIGKAEFSFPSWFPQDARKLLKRILDPNPLTRIKMPELLEDRWFKEGYKPASFEEEEGINLDDVAAAFNGSKENLVTERKEKPVSMNAFELISRSQSFNLNNLFEKEMGLVKRETRFTSQCPPHEIMTKIEEAARPLGFNVDKRNYKMRLKGDKSGRKGYLSVATESLPIYLVQFSKWLLPYTWWSCGRRGVTRWSFTSSTKTFHQVCKT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1417 474 CDD CIPK_C 351 441 - -
Bisa06g1417 474 Pfam NAF domain 347 407 IPR004041 GO:0007165
Bisa06g1417 474 Gene3D Kinase associated domain 1, KA1 344 442 - -
Bisa06g1417 474 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Bisa06g1417 474 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 46 432 - -
Bisa06g1417 474 ProSiteProfiles Protein kinase domain profile. 55 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1417 474 Pfam Protein kinase domain 55 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1417 474 SMART serkin_6 55 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1417 474 Gene3D Transferase(Phosphotransferase) domain 1 135 331 - -
Bisa06g1417 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Bisa06g1417 474 FunFam Non-specific serine/threonine protein kinase 46 134 - -
Bisa06g1417 474 ProSiteProfiles NAF domain profile. 345 369 IPR018451 GO:0007165
Bisa06g1417 474 FunFam Non-specific serine/threonine protein kinase 48 348 - -
Bisa06g1417 474 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Bisa06g1417 474 SUPERFAMILY Protein kinase-like (PK-like) 52 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1417 Bisa-ChrBisa06 49794407 49799631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1417 45 434 CBL-interacting serine-threonine protein kinases AT1G01140 73.282 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa06g1417 Pkinase 4.9e-73 CL0016