Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1414 ATGGAGGACATGATAATCTCTCCTTCTTCCTCTTCCTCTCTGGTTCCTCTCTCTCACTCCAGGGACAACCCACTCACCCTTCAGCACAAGCTTCAATTTTTACTCCATTCCCAGCCCTTCTCCTGGCTCTACGCCATCTTCTGGCAGACCTCCACCGACGACAATGGCCGCCTCTCCCTCTCCTGGGCCGACGGCCATTTCCGACCCCCCAAAGAATCCCCCACCTCCCCCACCAAGTTCTGCGAAGTCGTCGAGAGCCCCAACGGCACCATCGACGACAACCTCAACGACGCCGAGTGGTTCTACGTCGTGTCCCTCACTCGCACCTTCCCCCTCGCCGATTCATCCTCCCTCCTAGCCAAAGCCTTCACCTCTGCTTCTCCTCTCTGGGTCAACATAACAGAGCCCGAGCTTCAGTTTTACAATTGCGAGCGCACCAAAGAAGCCTCCATGCACGGGATTCGAACCCTCCTCTGTATTCCTGCAAATTACGGCGTCCTCGAAATGGGTTCCTCCGAAATCATCCCGCAAAATTGGGGTCTCATCCACCAAGCCAAAACTCTGTTCGGGTCCTCCGATCTTAACATCCAGCCCAATGATAGCCACCCAAACCAGGTTCAACTCATCGACGACCTGAACCAAACCCAGACCCAGACCCAAACCCAGAACCAGAACATCTCCTTCGCTGACATCGGCATTATCGCCGGCGTACCGGAAGAAGAACAGAAAGACAATATTCATAAAAAGGAATTGGATATCAAATTCGGATCCTACGCGGAGTCGGAGCAGTCCCATTCGGATTCTGATTACCCGATAGTCGAGAGGAAACCTGCCAAGAAGAGAGGCCGGAAGCCCGGGGTGGGGCGGGAGACGCCGTTAAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCACCGGTTCTACGCGCTACGCGCCGTCGTGCCGAACGTGTCGAGAATGGACAAGGCGTCGCTGTTATCGGACGCCGTGGCGTACATCAAGGAGCTGAGAGGGAAGATCGAGGAATTAGAGTCTCAGGTTCAGAGGGAATCGGCGAGTTGTAAGAGGGTGAAGCTGGAAATGGCGGAGACGGGGGAGTCATCGACGGTGGAGCAGAGCGGGCCCAATGGGGCGGGGTGCGGGGGGCTGGGGCTGGGGCTGGGGCTGGAGGTGGAGGTGAGGGTGATTGGGCCGGACGCGATGGTGCGGGTTCAGTCGGAGAACAGGAACCACCCGGGGGCTAGGCTGATGGGGGCGTTGAGAGACTTGGAGTTTCAGGTGCACCATGCGAGCATCTCGTGCGTCAACGAGGTCATGCTTCAAGACGTCGTCGTTAAGGTCCCTCACGGATTGAGAAGCGCAGAGAGTCTCATCAAATCCGCCATCATTAGGAGATTGGATCAGTAG 1416 0.5713 MEDMIISPSSSSSLVPLSHSRDNPLTLQHKLQFLLHSQPFSWLYAIFWQTSTDDNGRLSLSWADGHFRPPKESPTSPTKFCEVVESPNGTIDDNLNDAEWFYVVSLTRTFPLADSSSLLAKAFTSASPLWVNITEPELQFYNCERTKEASMHGIRTLLCIPANYGVLEMGSSEIIPQNWGLIHQAKTLFGSSDLNIQPNDSHPNQVQLIDDLNQTQTQTQTQNQNISFADIGIIAGVPEEEQKDNIHKKELDIKFGSYAESEQSHSDSDYPIVERKPAKKRGRKPGVGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYIKELRGKIEELESQVQRESASCKRVKLEMAETGESSTVEQSGPNGAGCGGLGLGLGLEVEVRVIGPDAMVRVQSENRNHPGARLMGALRDLEFQVHHASISCVNEVMLQDVVVKVPHGLRSAESLIKSAIIRRLDQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1414 471 Coils Coil 329 363 - -
Bisa06g1414 471 CDD bHLH_AtAIB_like 288 352 - -
Bisa06g1414 471 PANTHER MYC 14 468 IPR045084 GO:0003700|GO:0006355
Bisa06g1414 471 Pfam Helix-loop-helix DNA-binding domain 294 339 IPR011598 GO:0046983
Bisa06g1414 471 SMART finulus 296 345 IPR011598 GO:0046983
Bisa06g1414 471 MobiDBLite consensus disorder prediction 259 290 - -
Bisa06g1414 471 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 27 189 IPR025610 -
Bisa06g1414 471 Gene3D - 288 354 IPR036638 GO:0046983
Bisa06g1414 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 339 IPR011598 GO:0046983
Bisa06g1414 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 282 352 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1414 Bisa-ChrBisa06 49720770 49722185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1414 23 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 33.029 6.59e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa06g1414 bHLH-MYC_N 7.4e-39 CL0161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1414 06 49720770 49722185 Bisa06g1414 06 49720770 49722185 ECH