Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1398 ATGAATTCTCTTTTCGAAGAAGAGTTTGTAGAGAGAGATCCTTCCGGTCGCTATCTTCGTTACAATGAAATCTTGGGCAGGGGTGCTTTCAAGACTGTTTATAGGGCATTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAATCAAGTTAGGATTGATGATCTCTTGCAGTCTGCAGAAGATCTATCAAAATTGTATTCTGAAGTTCATCTTTTGAAGACTTTAAAACATGAAAATATCATTAAGTTCTATAATTCCTGGATTGATGATGAGAAGAAAACTGTTAACATGATTACTGAGCTCTTCACATCTGGAAATTTGAGGCAATATCGTAAGAAGCATAAATATGTTGACTTGAGGGCCATAAAAAACTGGGCTAGGCAGATTCTCCGAGGCTTAGTATATTTACACAATCAGAAGCCACCTATTATTCACAGAGATTTGAAATGTGACAATATTTTTGTGAATGGACACCAAGGAGAAGTTAAGATTGGAGACCTTGGCTTGGCAATTGTTATGAAGCAGCCAACTGCTCGAAGTGTCATTGGTACACCTGAGTTTATGGCTCCGGAGCTATATGAAGAGGAGTACAATGAACTAGTTGACATCTATTCTTTTGGGATGTGCATATTAGAGATGGTTACTTTAGAGTATCCCTATATTGAATGTAGAAATTCGGCTCAGATCTTTAAGAAAGTTACTTCTGGTATCAAGCCGGCATCCCTTAGTAGAGTGAAAGACCCCCACATTAAGGAGTTTATTGAGAAATGTATTGTTTCAGTCTCAGAGAGATTGTCTGCAGAAGAGCTTCTTAAAGATCCATTTCTCCAAGTTGAGTGTCCAAAAAATCCAGTTCGTGATTCTCTACAGTTACCTATTCAAACTTCTAAAGCTATATATACACCCAATTCTGCTCCTCTATCTATGGACATAGATGTTGACTACAAACAGGTTTCTGGAAGTACAAATACCGGAAGCAACAATGGAAGTATAGATAGTCCAATTTTAGAATTTCAAAGGACTACTAAGAACAACGAATTTAGATTAAAAGGTACCAAAAACAATGATACCTCAGTATCATTGACCTTGCGGATTGCTGATCCATATGGTCGGGTAAGGAATATACATTTTCTCTTTTATCTTGATACAGATACTGCAATTTCTGTAGCCTCAGAGATGGTTGAGCAACTAGAGTTGGAGCATCATGATGTGTTGTTAATATCCGAGCTTATTGATAACTTGATTGTGAGACTTATGCCTGGGTGGAAGCCTTCATCTAATTATTGCTCAAGTGGAGAGATAAATCTCTATGGTGGGTTTTCGGAACATGGAGATGCCCAAACCTCAATGGCATCTCCATGGGATTCTATCCTAACTAGTGTTCCTTCTAGATGGGTTGTCGAGCAAAAGGGTTTATGCAACAATGCTAATCATACTAGTTTTCAATATTGTTATTCTTCGTCTCCTAGTTTGGCTAACTTTGAAGATCGATGTTCACTAAGATCTGTAAATTCTGAGATAGTTGGGGAAGCTGCGTCCGTAAAAAGCGACAATTTTCTTGATTTCAATTTTGATAAGAGCTATAAAGGCTTAAGTGCATCTAACTCAGAGTTGGAGCTAGGGGATGCATATTTTGAAGATTGTAAATTGCAAACAATTGGTAGCAATACCAATGCTGAAGAAGGCACGGCGACAAATAATATCATGAAGAATTTTGAATTTGTAAACCCAACTTTGAATGCAACATCTAAGACAAGCAGTTGTTGTTCCATTTATTTAGAAGAAAAAGATATTGATGATGAGCTCAAGTTAGAACTTAATTCAATTGAAGCACAGTATCAGCATTGGTTTAAAGAACTTGCTAGAATGAAATTGGAAGCATTAGAAGCCACCAGAAAGAGATGGAATGCCAAGAAGAAAGTGGCTGTTCATTGA 1935 0.3731 MNSLFEEEFVERDPSGRYLRYNEILGRGAFKTVYRAFDEVDGIEVAWNQVRIDDLLQSAEDLSKLYSEVHLLKTLKHENIIKFYNSWIDDEKKTVNMITELFTSGNLRQYRKKHKYVDLRAIKNWARQILRGLVYLHNQKPPIIHRDLKCDNIFVNGHQGEVKIGDLGLAIVMKQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTLEYPYIECRNSAQIFKKVTSGIKPASLSRVKDPHIKEFIEKCIVSVSERLSAEELLKDPFLQVECPKNPVRDSLQLPIQTSKAIYTPNSAPLSMDIDVDYKQVSGSTNTGSNNGSIDSPILEFQRTTKNNEFRLKGTKNNDTSVSLTLRIADPYGRVRNIHFLFYLDTDTAISVASEMVEQLELEHHDVLLISELIDNLIVRLMPGWKPSSNYCSSGEINLYGGFSEHGDAQTSMASPWDSILTSVPSRWVVEQKGLCNNANHTSFQYCYSSSPSLANFEDRCSLRSVNSEIVGEAASVKSDNFLDFNFDKSYKGLSASNSELELGDAYFEDCKLQTIGSNTNAEEGTATNNIMKNFEFVNPTLNATSKTSSCCSIYLEEKDIDDELKLELNSIEAQYQHWFKELARMKLEALEATRKRWNAKKKVAVH 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1398 644 Gene3D Phosphorylase Kinase; domain 1 4 100 - -
Bisa06g1398 644 SUPERFAMILY Protein kinase-like (PK-like) 21 312 IPR011009 -
Bisa06g1398 644 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 630 - -
Bisa06g1398 644 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1398 644 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 359 415 IPR024678 GO:0004674|GO:0005524
Bisa06g1398 644 Gene3D Transferase(Phosphotransferase) domain 1 102 281 - -
Bisa06g1398 644 Coils Coil 606 644 - -
Bisa06g1398 644 CDD STKc_WNK 17 276 - -
Bisa06g1398 644 FunFam Probable serine/threonine-protein kinase WNK1 5 100 - -
Bisa06g1398 644 Gene3D - 357 427 - -
Bisa06g1398 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Bisa06g1398 644 FunFam probable serine/threonine-protein kinase WNK9 102 280 - -
Bisa06g1398 644 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1398 644 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1398 Bisa-ChrBisa06 49261196 49264359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1398 558 644 MAP Kinase Kinase Kinase AT5G41990 29.885 2.19e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bisa06g1398 Pkinase 7.7e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1398 06 49261196 49264359 Bisa06g1398 06 49261196 49264359 ECH