Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1382 ATGGGTCCAGCGAGTTCCTATGGGGAAACAGGTTCGCGTGAAGAAGACGATCTGTATACAGAACTATGGAGGCTATGTGCAGGGCCTTTGGTGGAAGTTCCTCGTCATGGAGAGAGAGTCTTCTACTTCCCTCAGGGCCACATGGAACAATTGCAAGCATCAACGAATCAGGAATTAAACCAGCAAAAAATTCCCCATTTTGATCTTCGATCAAAGATTCTTTGTCGTGTTATGCACATTCAGCTATTGGCGGAACAAGAAACTGATGAAGTCTATGCTCGTCTCACTTTGCTCCCAGAATCAGATCAAACTGAGCCTGCAAGTCCATATCCATGTCCTCCTGAAACCCAGAAGCAAACATTTCACTCATTTTGCAAGATATTAACGGCCTCTGATACCAGCACACACGGAGGATTTTCAGTTCTCCGGAAGCATGCCACCGAGTGCCTTCCTCAGCTGGATATGACCCAGGCAACCCCAACTCAAGAGTTGGCGGCCAAGGATCTTCACGGGTTCGAGTGGAAGTTTAAACATATATTCAGAGGTCAACCAAGGAGGCACTTGCTTACAACCGGCTGGAGTACATTTGTCACCTCAAAGAGATTGGTCGCAGGAGATGCTTTTGTGTTTTTAAGGGGAGAGAATGGAGAACTTAGAGTTGGTGTTAGGCGTCTCTCCCGGCAACAAAGTTCGATGCCTTCGTCTGTGATATCAAGCCAGAGTATGCATCTTGGAGTGCTTGCCACTGCCTCACATGCTGTTATGACTGGCACTATGTTTTTGGTTTATTACAAACCGAGGACTAGCCAGTTCATTATTGGTGTGAACAAATATCTGGAGGCAGTCAGCAATAAGTTTTCGGTTGGCATGCGTTTCAAGATGAGATTTGAAGGAGAGGACTCACCTGAGAGAAAGTTTTCGGGTACTATTGTCGGGGTTGGGGATGCTTCTCCAGAGTGGTTGGACTCTAAGTGGAGGTCATTGAAGGTTCAATGGGACGAACCAGCAACAATTCCAAGGCCGGAGAGGGTTTCACCATGGGAAATAGAGACTTTTGTGGCGTCAACAACTACAAATGTTACTCATCCAGCAATAAAGAACAAAAGGCTCCGGCCTGCTGATGTTCCATCTTCTGAAATTACTTCCAATTCAACTGCTTCGCCTTTCTGGTATCACGGACCATCCCAGTCCCATGAGCATACACAATTAGGGAGTGGCATGGAAGTCCAAAGCAGTGAAAGCTCGGTTTTTTGGTCTCTGAGGCAGAAAGAAGTCACTAGCAGCCAAATGAACACTCACTGTAGCTCGAGAGTACGCATGGAAGGAATATGGCCTGCATCTCCACATTTGAATGTCTCTCCAAACTTCTTTTCGGACCCGAGAAACAACAAAGCTGGTGGAGCAACACAGCCTTCTATCTCTGGTTACACTCCTGTATTAAGTAAACCAAATGATGATGGCCCCAGAAATGATCAGGCCGAAAATGGGAAAAAGAGTGAGAGTTCCATAGATTACTGGTTATTTGGAGTTAATTTGACCAAAAATTCAAAAACTGTTCTTCCTCATCCATCTGAGACCGAAATGGGAAGCCCAACTACTATTCCTAGTGGTCCCAAAGAATCTAACCCTTCTGCTGCAGCATGTGAAACTGAGAAGCGTCAGAATCCCAACAATAATACAGTGTCCCAAAAGGAGCAAAAGCAAATTGATGCATCACCAAATGAGCGACAGGGCAGGCAGGCCTCTGTACTGTCCTTGAGGACCCGTACAAAGGTGCAAATGCAAGGTGTTGCCGTTGGTCGCGCGGTTGACTTGACCATGTTGAAAGACTATGATGATCTCATAGACGAGCTCGAGAAATTATTTGATATCAGAGGAGAACTTCGCCCGCAGAACAAATGGGCAGTAACTTTTACAGATGATGAAAATGACATGATGCTCGTGGGCGATGATCCATGGCTGGAGTTCTGTTCTATGGTGAAGAGGATCTTCATATATTCAAGCGAGGAGGTGAAGAAGATGAATCCAAAGTTCAAGCTTCCTGCTTCATCTTCAGAGGTTGAAGAGACTATTGTGAGCTTGGATTTGCAGAATAGGGATGAAACTGGATAG 2112 0.4574 MGPASSYGETGSREEDDLYTELWRLCAGPLVEVPRHGERVFYFPQGHMEQLQASTNQELNQQKIPHFDLRSKILCRVMHIQLLAEQETDEVYARLTLLPESDQTEPASPYPCPPETQKQTFHSFCKILTASDTSTHGGFSVLRKHATECLPQLDMTQATPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLSRQQSSMPSSVISSQSMHLGVLATASHAVMTGTMFLVYYKPRTSQFIIGVNKYLEAVSNKFSVGMRFKMRFEGEDSPERKFSGTIVGVGDASPEWLDSKWRSLKVQWDEPATIPRPERVSPWEIETFVASTTTNVTHPAIKNKRLRPADVPSSEITSNSTASPFWYHGPSQSHEHTQLGSGMEVQSSESSVFWSLRQKEVTSSQMNTHCSSRVRMEGIWPASPHLNVSPNFFSDPRNNKAGGATQPSISGYTPVLSKPNDDGPRNDQAENGKKSESSIDYWLFGVNLTKNSKTVLPHPSETEMGSPTTIPSGPKESNPSAAACETEKRQNPNNNTVSQKEQKQIDASPNERQGRQASVLSLRTRTKVQMQGVAVGRAVDLTMLKDYDDLIDELEKLFDIRGELRPQNKWAVTFTDDENDMMLVGDDPWLEFCSMVKRIFIYSSEEVKKMNPKFKLPASSSEVEETIVSLDLQNRDETG 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1382 703 Pfam Auxin response factor 250 329 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa06g1382 703 FunFam Auxin response factor 285 356 - -
Bisa06g1382 703 FunFam Auxin response factor 122 226 - -
Bisa06g1382 703 MobiDBLite consensus disorder prediction 517 581 - -
Bisa06g1382 703 CDD B3_DNA 122 224 IPR003340 GO:0003677
Bisa06g1382 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 675 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa06g1382 703 FunFam Auxin response factor 582 675 - -
Bisa06g1382 703 ProSiteProfiles PB1 domain profile. 587 679 IPR000270 GO:0005515
Bisa06g1382 703 Gene3D - 583 675 - -
Bisa06g1382 703 MobiDBLite consensus disorder prediction 517 540 - -
Bisa06g1382 703 SUPERFAMILY DNA-binding pseudobarrel domain 115 253 IPR015300 -
Bisa06g1382 703 MobiDBLite consensus disorder prediction 547 581 - -
Bisa06g1382 703 Gene3D - 121 225 IPR015300 -
Bisa06g1382 703 MobiDBLite consensus disorder prediction 455 479 - -
Bisa06g1382 703 Pfam B3 DNA binding domain 124 224 IPR003340 GO:0003677
Bisa06g1382 703 SUPERFAMILY CAD & PB1 domains 582 663 - -
Bisa06g1382 703 SMART B3_2 124 226 IPR003340 GO:0003677
Bisa06g1382 703 ProSiteProfiles B3 DNA-binding domain profile. 124 226 IPR003340 GO:0003677
Bisa06g1382 703 Gene3D - 285 358 - -
Bisa06g1382 703 MobiDBLite consensus disorder prediction 455 499 - -
Bisa06g1382 703 Pfam AUX/IAA family 559 676 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1382 Bisa-ChrBisa06 48881056 48885121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1382 11 688 B3 DNA Binding Superfamily AT4G23980 56.459 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa06g1382 AUX_IAA 2.1e-12 CL0072