Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1378 ATGGAGCCACCGCCTCCTCCCACTCACGACGACGAACTGACAGCCACCACAAGCTGCGCAGCCGCATCCGCCGCAGTGGTCGAGGCCTCCGAGAAATCCGACAACGCCAGAGCCGGCGGCACGCGTCACCCAGTCTACCGCGGCGTCCGGAAGCGGCGGTGGGGGAAATGGGTGTCGGAGATCCGGGAGCCGCGCAAGAAGTCGCGAATATGGCTCGGCTCCTTCCCGGTGCCGGAGATGGCGGCGAAGGCGTACGACGTGGCGGCGTACTGCCTGAAAGGCCGGAAGGCGCAGCTCAATTTCCCCGACGAGGTCGAGCACTTGCCGATGCCACCCACCACAGCCGCCAGAGACATCCAGGCCGCCGCGGCCAAGGCAGCTCAAGCAATGAAAGCCTCGGCGAAGAAGAGTAGCATTATGTGCGACGTCGGCGACGGTGACAGCGGCGGCGATGATTTTTGGGGAGAGATTGAATTGCCGGAGCTGATGAACAGTGAGTATTGTTGGAATTGTTCCAGCGGGACCTCGTGGAGTGCCTCCGGCGACATGTCGGGGTGGACGGAGGTGGAGGCGCCGCCGTTGCAGCAACCATTCATGGCGTGTCTATAA 609 0.6355 MEPPPPPTHDDELTATTSCAAASAAVVEASEKSDNARAGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVEHLPMPPTTAARDIQAAAAKAAQAMKASAKKSSIMCDVGDGDSGGDDFWGEIELPELMNSEYCWNCSSGTSWSASGDMSGWTEVEAPPLQQPFMACL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1378 202 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Bisa06g1378 202 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Bisa06g1378 202 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Bisa06g1378 202 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Bisa06g1378 202 PRINTS Ethylene responsive element binding protein signature 84 104 IPR001471 GO:0003700|GO:0006355
Bisa06g1378 202 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Bisa06g1378 202 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Bisa06g1378 202 SUPERFAMILY DNA-binding domain 45 104 IPR016177 GO:0003677
Bisa06g1378 202 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
Bisa06g1378 202 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1378 Bisa-ChrBisa06 48797737 48798345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1378 1 202 AP2-EREBP Transcription Factor Family AT1G01250 55.825 6.46e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g1378 AP2 2.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1378 06 48797737 48798345 Bisa06g1378 06 48797737 48798345 ECH