Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1365 ATGGTTCATAATAAAAAAAATTCGCAGCCAGGAGCAGGTGGCAATGGTGTTACCTCATGGTTCCTGTCATGTTATGTGACATTGTTTTTGTACCATGTGAATGCAACTTCTTCTGAATACAGAAAGAAGAAGCCAGTCTCAGACTTATCAGGCATGGGAAAGCGCCTCCAAAGTGCTGCTTCTGACGGTGACATACCAGAAAAGCGAATGCGAAGGAGCAAGTCCATTTGCTCCTGCAACTCTCCTCGTCCTCCCTTTCTCTCTCCCCATTCCAATTTCAACTGGTACGAAGAGGACATATGGTCGGAGATTGCTAAGCTTCTGGATGGAAAATCTCTGGTGATGCTGGCAGCTACAAACCGATGGTTCCGTCGTGTTATTATGGACGACACTATATGGAAGTTTGTGAGTCTGCGTGATCTTCAGGTCTCACCTCCTCCTCCGCGCGTGGCATACAGGTGGAATAAGCTGTACACTTCAGCCTTCAATGGAAGCCACTCTTTTATGTTCCGCCAGCAGGAGAAACACATTGATTGGATGCGTATTGGTGCTTTTTCCCTTGACTCTTCAGTAGCCGTCCTGGCAGAGAGACTAACCATTCCGAGGAAGATCAGAGAGGAAGATAAAGCCAAAAAAATGTTGCAGTCTCATGGTTGTTGCCTGTTAGACAATGTTAAATGTGGGATCTGGATAGCTGACCTGCAGCTCGTGCGATGCCCAGTCTGTGATCTCAATACATGCGATGGAACAATGCAGACTTTAGATGCAAGGCATGTAGAGCTTTTCCTCTGTGAAGGATACCAAGATGGGAGCTGGGAATACCAGCTTGTAGGATCTCATGATATCAAAAAGCGAGCACATGGGGCTGCTGGTGCCATTTTTGATTTCACACATCTGAAAGATTCTTCAACTTCCGCGGTATTTGATTACACATCATGGATAGGAAGACCGAATGATTGGCAACCCAAGGCCAATATTGCTCCCCATGCAGTTGCTGTGAATACTAATTTACAAGAAAATGACGGTCTTCATGTGAAATACCACGCTATGAAGGCTGGAGCTGATGGAGAAGTTGTTGCCATTAGAATCTCTCAGCAGCTCCTAGTTGCAAAATGGCAACTGATCACGAAGCATTTCTTTGTATGCAACAGTAGTAATGCATCTGAAAATCTTGTCTCATCAGTTTCACTAGATGTCCTCCTCTTTCACTTCTTCATCATCCCTATCATACATGCCTTTGAGGATTGCCCATTCTCCAGTTGTCTGGACAGCAAGATCGTTATTCGTTTCCCCTTCAGAATACAAGAGGAGCAACATCCGTACTGTGGTTATCCTGGTTTCAGTTTAACCTGCACAAATGGCAGCAGAACATTTATGAAACTTCCTTATTCTGGAGAATTCTATGTCCGCAACATCAACTATCTCTCACAACAGATTCAACTCTACGACCCTGACGATTGCCTTCCCAAACGTCTTCTAAGCCTCAACCTCTCAGGTTCTCCCTTTGTGGCTATTTTCAGCCGGAACTACACCTTCCTGAGCTGCCCGTCTCAGAACACAAGGTCTGATTTCACTGCCATTGATTGTCTCAGCAACTCCACAAGTTTCGTCTCAGCCATTCCTTCAGCTGTCCTGGGCAACTCATTGCAGGAACCTTCATGCTCTGTTATTAGCAGACCTTCGGTTCCTGTGGTAATGAACGAAGAAGATCTCAGAGATGACTTCAGTAAAGATCTGCTGTTGACATGGCATACGCCTAATTGCACAGATTGTGAATCGCGTGAGGAGATGTGTGGATTTGAGAGCACAGACAGTGATCGAGTTCGTTGTTTCTCTGATTCAAAATCAGCTAATTCGCGGGGACTTCGACTTTTCAGAATCATCATCTTATCCATCACCGCACCCGCGGTGATCTGCGTCACCGTCATCGCATGCTTCGCCTGTCTCATGGACAGCAGAAGAGGCATCATCACACCCAGCAGGACACTTCCAGTCCTATCACCACCGCCTTCCACCACCGCCGCGACAATGGGTCTCGACGAATGCACCATCGAGTCCTACCAGAAGGTGGTGCTCGGCGAGAGCCGCCGGCTGCCGCCGGGACCCAACGATGGAACCTGCGCCATATGCCTAACGGAGTATAACACCAAAGACACTGTGAGATGCATCCCTGAATGCAGACACTGCTTTCACTGTGAGTGCATTGATGAGTGGCTAAGAACGAATAGTACTTGCCCTGTTTGTCGGAAGTCTCCATCCCCTTCTTCTTCTTCGACTCCTGTTCATGTTATATCTACTCAGAGTAACACTTGA 2313 0.4695 MVHNKKNSQPGAGGNGVTSWFLSCYVTLFLYHVNATSSEYRKKKPVSDLSGMGKRLQSAASDGDIPEKRMRRSKSICSCNSPRPPFLSPHSNFNWYEEDIWSEIAKLLDGKSLVMLAATNRWFRRVIMDDTIWKFVSLRDLQVSPPPPRVAYRWNKLYTSAFNGSHSFMFRQQEKHIDWMRIGAFSLDSSVAVLAERLTIPRKIREEDKAKKMLQSHGCCLLDNVKCGIWIADLQLVRCPVCDLNTCDGTMQTLDARHVELFLCEGYQDGSWEYQLVGSHDIKKRAHGAAGAIFDFTHLKDSSTSAVFDYTSWIGRPNDWQPKANIAPHAVAVNTNLQENDGLHVKYHAMKAGADGEVVAIRISQQLLVAKWQLITKHFFVCNSSNASENLVSSVSLDVLLFHFFIIPIIHAFEDCPFSSCLDSKIVIRFPFRIQEEQHPYCGYPGFSLTCTNGSRTFMKLPYSGEFYVRNINYLSQQIQLYDPDDCLPKRLLSLNLSGSPFVAIFSRNYTFLSCPSQNTRSDFTAIDCLSNSTSFVSAIPSAVLGNSLQEPSCSVISRPSVPVVMNEEDLRDDFSKDLLLTWHTPNCTDCESREEMCGFESTDSDRVRCFSDSKSANSRGLRLFRIIILSITAPAVICVTVIACFACLMDSRRGIITPSRTLPVLSPPPSTTAATMGLDECTIESYQKVVLGESRRLPPGPNDGTCAICLTEYNTKDTVRCIPECRHCFHCECIDEWLRTNSTCPVCRKSPSPSSSSTPVHVISTQSNT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1365 770 Pfam Wall-associated receptor kinase galacturonan-binding 416 483 IPR025287 GO:0030247
Bisa06g1365 770 Pfam Ring finger domain 706 749 IPR001841 -
Bisa06g1365 770 SUPERFAMILY F-box domain 98 157 IPR036047 GO:0005515
Bisa06g1365 770 PANTHER F-BOX PROTEIN RMF 63 368 - -
Bisa06g1365 770 SUPERFAMILY RING/U-box 702 757 - -
Bisa06g1365 770 SMART ring_2 707 748 IPR001841 -
Bisa06g1365 770 MobiDBLite consensus disorder prediction 750 770 - -
Bisa06g1365 770 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 670 754 IPR013083 -
Bisa06g1365 770 ProSiteProfiles Zinc finger RING-type profile. 707 749 IPR001841 -
Bisa06g1365 770 CDD RING-H2_EL5-like 707 749 - -
Bisa06g1365 770 MobiDBLite consensus disorder prediction 44 64 - -
Bisa06g1365 770 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1365 Bisa-ChrBisa06 48467687 48480084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1365 420 754 C3H Transcription Factor Family AT2G25410 44.186 2.02e-85 274