Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1355 ATGTCTCAGTTTAGAACCAGGTATCGAGTACTTCGAAGGGGTGCGTTGGTCATTGACATCCTATCAATTATTCCACTTCCACAGGTGATTGTTTTAGCTATTCCATCAATGGTTTCAAATCCATATGTAGCAAAGGATTGGTTAATGTATATAATATTAATCCAGTTTGTCCCAAGATTTCTTCGGAGATATCCATTGTTCTGGGAAGGAACTCGAATTTTTGGCATATTGACTGAGACAGCATGGGCTAGTGCTGCCTATAATCTCGTTCTCTATATGTTATCAAGTCATATAGTTGGAGCTTTCTGTTCTCTGGGACAGAACCTCCAGACAAGTACATATGTTGGGGAGATAATCTTTGCTGTCTTCATCGCCATCTTTGGGTTGGTTTTGTTCTCATTACTTATTGGAAATATGCAGCAATATTTGCAATCTGCAACCGCTAGAGTTGAAGAAATGCGAATGAAAACACAGAAAAGTAGGGAATTACAGCAGTGGATGTCCCGTCGTATGTTACCTGATTGGTTGAGGAAAAGAATCAGACGGTATGAAAACTACAAATGGCAAGAAAATAGGGGTGTAGAGGAGGAAGCAATAATTCAAAACCTTCCTAAAGATCTCAGGAGGAACATAAAGCATCATCTTTGCTTGGGTTTATTGAAAAAAGTGCCAATGTTCGAGAAAATGGACGAACAATTGTTGGATGCATTGTGTGATAGATTAAAGCCAGTGTTTTACACAGAGAAGAGCCACATAGTTCGCGAAGGCGATCCCGTCGATGAAATGCTCTTCATTATGCGAGGAAATTTGGCTACGATGAGAACAAATGGTGGAAGAACTGGCTTCTTCAACTCCTTTGTGTTGAAGGCAGGTGACTTCTGTGGAGAAGAGCTTCTAACATGGGCTTCCGACCCTAACTCACCCTCAAATCTTCCCATTTCAACTAGAACAGTGGAATCTATATCGGAAGTTGAAGGCTTTGCTCTCACGGCTGATGATTTGAAGGATGTTGCTTCCAAATTTTGGCGCTTTCATGCCAAACATATCCAGCACATTTTTAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCAAGCTTCATACAAGCAGCTTGGCGTCGCTACTACAGAAGGAAGATTGAAAAATCACTATTTGAAGCCGAAGAAAAGCAAAAAGATGCTTTGGCAAACGAGGAAGGGTCACAGCCAAGTCTTGGTGCCACCATATACGCATCGAGGTTCGCAGCCAATGCACTACGAAGCTTGCGAAAATATGACAAACATAGCAATAGAATGTCTCAAAAATTACTGCCTCTGATGCCTCAAAAGCCAGCAGAGCCTGATTTTACTTCTCAGGAATTTTATGGGCGTGTTAGTCTTGAGCAATTATAA 1392 0.4145 MSQFRTRYRVLRRGALVIDILSIIPLPQVIVLAIPSMVSNPYVAKDWLMYIILIQFVPRFLRRYPLFWEGTRIFGILTETAWASAAYNLVLYMLSSHIVGAFCSLGQNLQTSTYVGEIIFAVFIAIFGLVLFSLLIGNMQQYLQSATARVEEMRMKTQKSRELQQWMSRRMLPDWLRKRIRRYENYKWQENRGVEEEAIIQNLPKDLRRNIKHHLCLGLLKKVPMFEKMDEQLLDALCDRLKPVFYTEKSHIVREGDPVDEMLFIMRGNLATMRTNGGRTGFFNSFVLKAGDFCGEELLTWASDPNSPSNLPISTRTVESISEVEGFALTADDLKDVASKFWRFHAKHIQHIFRYYSLQWRTWAASFIQAAWRRYYRRKIEKSLFEAEEKQKDALANEEGSQPSLGATIYASRFAANALRSLRKYDKHSNRMSQKLLPLMPQKPAEPDFTSQEFYGRVSLEQL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1355 463 SUPERFAMILY Voltage-gated potassium channels 5 144 - -
Bisa06g1355 463 Gene3D Jelly Rolls 223 343 IPR014710 -
Bisa06g1355 463 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 102 - -
Bisa06g1355 463 SUPERFAMILY cAMP-binding domain-like 157 352 IPR018490 -
Bisa06g1355 463 CDD CAP_ED 225 356 IPR000595 -
Bisa06g1355 463 Gene3D Helix hairpin bin 151 216 - -
Bisa06g1355 463 SMART cnmp_10 225 356 IPR000595 -
Bisa06g1355 463 FunFam Cyclic nucleotide-gated ion channel 1 223 341 - -
Bisa06g1355 463 ProSiteProfiles IQ motif profile. 361 390 IPR000048 GO:0005515
Bisa06g1355 463 ProSiteProfiles cAMP/cGMP binding motif profile. 225 317 IPR000595 -
Bisa06g1355 463 Pfam Cyclic nucleotide-binding domain 245 339 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1355 Bisa-ChrBisa06 48252843 48257599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1355 104 453 Ion Channels AT5G53130 70.170 6.42e-168 488