Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1354 ATGAACACTAAGGAAAAGAAATTTGTGAGGTTTGACGTCTGGGGTTCAGAATCATCTTTCAGTGTTGAGAAGACAAATGCCACTGATGAAGGATATCATCAAAGAAAATCCAAACCAAGAGTAAAACATGTTTTCAAGAACATTAGAAGGAAACTCCAGAGAAGTTCTGAGAAGATAAAAAACATGAGGAAACCCACAAATGTTCATCCAGTAAGCGATGAAAAACCGAAAGAGCCGGCCTCAAAGAGCAAGATTCTGGATCCACAGGGCTCACTCCTTCAGAAATGGAACAAAATATTTGTGATCACGTGTGTGATGGCAGTGTCTGTGGACCCTCTGTTCTTTTACGTCCCAGTGATTGATGCCAAGCGAAAATGCCTTGATCTGGACCATTCATTGCAGATCACTGCGAGTGTTCTTCGTACGTTCTTCGATCTCTTTTACATTCTGCACATAATGTTTCAGTTTCGAACCGGGTTCATCGCGCCTTCTTCTCGAGTGTTTGGAAGGGGTGAACTGATTGATAATCCTGTGGCTATTGTCAAAAGATACTTATCTTCATACTTCATCATTGACTTCCTCTCGATTATTCCACTTCCTCAGGTGGTTGTTTTAGCCATCATTCCATCACTGGGTTCAGATACATTTGCAGCGAAGGACTGGTTGAAGTGTATAGTGTTAATGCAGTATGTGCCAAGAGTTCTTAGGATCTTTCCATTATTCAGAGAAGTAACTAGAACTTCTGGCATACTCACTGAGACAGCATGGGCTGGTGCTGCTTATAATCTCTGTCTTTATATGCTAGCAAGTCATCTAGTAGGAGCTTCATGGTACCTGCTCTCAGTGGAGACAGAGCTTCGATGCTGGCATCAAGAATTGAAAAATACTAGTCTCTCTGCACATTACTTGAGCTGTGGGCAACGTAATTCAACCACTGTCTTTAAAAGTCTTAATGGTTCTTGCCAACTTGATGATCCTGATGACATTAAGGATCCTAATGAATTCAATTTCGGAATCTTTTTCGATGCTCTAAAATCTCAAGTGGTAGAATCAAAAAGTTTTTCTCGGAAGTTCTTCTACTGCTTCTGGTGGGGCTTGCGCAATGTAAGTTCTCTAGGACAGAACCTCAAGACAAGTACATATGTTTGGGAGATAATCTTTGCTGTCTTCATCGCCGTCTTTGGGTTGGTTTTGTTTTCATTACTTATTGGAAATATGCAGAAATATCTGCAATCTACAACTGTTAGAGTTGAAGAAATGAGAGTGAAAAGGCGAGACGCAGAGCAGTGGATGTCCCACCGTATGTTACCAGAGCATCTAAAAGAAAGAATCAGATGCTATGAACACTACAAATGGCAAGAGAATAGGGGTGTGGAGGAAGAAACATTAATTCACAACCTTCCTAAAGATCTCAGAAGGGACATAAAGCGCCATCTTTGCTTGGATTTACTTAAAAAAGTGCCAATGTTTGAGAAAATGGACGAACAATTGCTGGATGCACTGTGTGATAGATTAAAGCCAGTACTTTACACAGAGAAAAGCCACATAATTCGCGAAGGCGATCCTGTCGATGAAATGCTCTTCATTATGCGAGGAAATTTGGCTACCATGACAACAAATGGCGGAAGAACTGGCTTCTTCAACTACTTTGTGATTAAGGCAGGTGACTTCTGTGGAGAGGAACTTCTAACATGGGCTTTGGACCCTAACTCATCCCCAAATCTTCCCATTTCAACCAGAACAGTGGAATCTATATCAGAAGTTGAAGCCTTTGCTCTCATGGCTGATGATTTGAAGTTTGTTGCTTCCCAGTTTCGTCGCCTTAATAACAAACATATCCAGCATACTTTCAAGTACTATTCCTTGCAATGGAGGACATGGGCTGCATGTTTCATACAAGTAGCTTGGCATCGCTATTGCAGAAGGAAGATTGAGAAATCACTACGTGAAGCCGAAGATAGGCTTCAAGATGCACTGGCAAACGAGGAAGGGTCATCCCCAAGTCTTGGTGCTACCATATATGCGTCAAGGTTCGCAACCAATGCACTACGAAGCTTGCGAAACAATGGCGAACGCAAAATCAGAATGCCTCAAAGATTACTGCCTCTGATGCCTCAGAAGCCAGCAGAGCCTGATTTCACTTCTCAAAAACTTTAA 2157 0.4182 MNTKEKKFVRFDVWGSESSFSVEKTNATDEGYHQRKSKPRVKHVFKNIRRKLQRSSEKIKNMRKPTNVHPVSDEKPKEPASKSKILDPQGSLLQKWNKIFVITCVMAVSVDPLFFYVPVIDAKRKCLDLDHSLQITASVLRTFFDLFYILHIMFQFRTGFIAPSSRVFGRGELIDNPVAIVKRYLSSYFIIDFLSIIPLPQVVVLAIIPSLGSDTFAAKDWLKCIVLMQYVPRVLRIFPLFREVTRTSGILTETAWAGAAYNLCLYMLASHLVGASWYLLSVETELRCWHQELKNTSLSAHYLSCGQRNSTTVFKSLNGSCQLDDPDDIKDPNEFNFGIFFDALKSQVVESKSFSRKFFYCFWWGLRNVSSLGQNLKTSTYVWEIIFAVFIAVFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPEHLKERIRCYEHYKWQENRGVEEETLIHNLPKDLRRDIKRHLCLDLLKKVPMFEKMDEQLLDALCDRLKPVLYTEKSHIIREGDPVDEMLFIMRGNLATMTTNGGRTGFFNYFVIKAGDFCGEELLTWALDPNSSPNLPISTRTVESISEVEAFALMADDLKFVASQFRRLNNKHIQHTFKYYSLQWRTWAACFIQVAWHRYCRRKIEKSLREAEDRLQDALANEEGSSPSLGATIYASRFATNALRSLRNNGERKIRMPQRLLPLMPQKPAEPDFTSQKL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1354 718 SUPERFAMILY cAMP-binding domain-like 418 612 IPR018490 -
Bisa06g1354 718 Coils Coil 641 661 - -
Bisa06g1354 718 FunFam Cyclic nucleotide-gated ion channel 1 416 480 - -
Bisa06g1354 718 SMART cnmp_10 489 620 IPR000595 -
Bisa06g1354 718 SUPERFAMILY Voltage-gated potassium channels 87 411 - -
Bisa06g1354 718 MobiDBLite consensus disorder prediction 56 85 - -
Bisa06g1354 718 ProSiteProfiles cAMP/cGMP binding motif profile. 489 572 IPR000595 -
Bisa06g1354 718 FunFam Cyclic nucleotide-gated ion channel 1 487 605 - -
Bisa06g1354 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 57 713 - -
Bisa06g1354 718 MobiDBLite consensus disorder prediction 56 82 - -
Bisa06g1354 718 CDD CAP_ED 489 620 IPR000595 -
Bisa06g1354 718 Pfam Ion transport protein 96 417 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa06g1354 718 Gene3D - 98 413 - -
Bisa06g1354 718 Gene3D Helix hairpin bin 416 480 - -
Bisa06g1354 718 Gene3D Jelly Rolls 487 607 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1354 Bisa-ChrBisa06 48239294 48247773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1354 1 715 Ion Channels AT5G53130 64.138 0.0 927