Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1350 ATGGGATGCATACCGCAATCTTCAGAAAATTCCAACGTGGAATTAATCTCAGTAGCAGCAGAATTGGAAGATAATGACAAAGCAACTTTGTGTTCTTACGCTTCCTGGCTCGCAAAGTATCCCTCAGCTTTGGACAATTTTGAGGAAATGATGAGCATTGCAAAAGAGAAAGATATTGTTGTGTTTTTGGATTATGATGGAACACTCTCTCCCATCGTAGATGACCCTGATCAGGCTAACATGACTGATGCTATGCGTGCAGCAGTTCATGAAATTGCATGTTGTTTTCCTACTGCAATTGTGAGTGGAAGAAGCAGAAAAAAGGTATATGAATTTGTGAAGTTACGGAATGTGTACTATGCTGGGAGTCATGGGATGGATATATCAACCCCAATGGGCTCTTCAAAATCTGAAGATCAGAAGCATCAGACAAAGGCTGTTGACGATAAGGGTAATCAAGTTGTTGACTTTCATCCTGCAAAAGAATTTCTGCCAGCAATCCGGGAGATAATTGAAGTTTTGAAAGAGAAGGTTTCAAGAATAGAGGGCTCCATGGTTGAAGACAATAAGTTCTGCATCACTGTACACTACAGGCAAGTGAAAAATGAAAAGGATGTTTGTATTCTCAGAGAGATGGTGGAGACTGTCATGGAAGCTTACCCTAATTTTCACATATCAGGAGGAAGAAAGGTTATAGAGATACGCCCAAATATAAACTGGGATAAAGGCTGTGCTCTGCAGTATTTGCTTCACACCCTTGGCTTTGACAGCTTCAACAATGTTGTACCTCTGTACATAGGGGATGACACAACTGACGAGGATGCTTTTAAGGTTATAAGACGCATTGGACAAGGTTTTCCAATAATAGTTTCATCTAAGGCTAAGGAGACAGAAGCTTGTTATTCTCTGCGTGATCCATCTGACGTTATGTCTTTCTTAATGCGTCTTACAAAGTGGAAGAAAAGCTTGGCATTTTGA 978 0.4049 MGCIPQSSENSNVELISVAAELEDNDKATLCSYASWLAKYPSALDNFEEMMSIAKEKDIVVFLDYDGTLSPIVDDPDQANMTDAMRAAVHEIACCFPTAIVSGRSRKKVYEFVKLRNVYYAGSHGMDISTPMGSSKSEDQKHQTKAVDDKGNQVVDFHPAKEFLPAIREIIEVLKEKVSRIEGSMVEDNKFCITVHYRQVKNEKDVCILREMVETVMEAYPNFHISGGRKVIEIRPNINWDKGCALQYLLHTLGFDSFNNVVPLYIGDDTTDEDAFKVIRRIGQGFPIIVSSKAKETEACYSLRDPSDVMSFLMRLTKWKKSLAF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1350 325 NCBIfam trehalose-phosphatase 59 318 IPR003337 GO:0003824|GO:0005992
Bisa06g1350 325 Pfam Trehalose-phosphatase 62 307 IPR003337 GO:0003824|GO:0005992
Bisa06g1350 325 FunFam Trehalose 6-phosphate phosphatase 160 237 - -
Bisa06g1350 325 FunFam Trehalose 6-phosphate phosphatase 166 324 - -
Bisa06g1350 325 CDD HAD_TPP 60 310 - -
Bisa06g1350 325 Gene3D - 61 303 IPR023214 -
Bisa06g1350 325 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 26 322 IPR044651 GO:0004805|GO:0005992
Bisa06g1350 325 NCBIfam HAD-IIB family hydrolase 61 282 IPR006379 -
Bisa06g1350 325 Gene3D - 141 237 - -
Bisa06g1350 325 SUPERFAMILY HAD-like 60 319 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1350 Bisa-ChrBisa06 48137998 48142395 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1350 61 313 Trehalose Biosynthesis Gene Families AT1G60140 27.376 5.70e-10 58.5