Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1339 ATGGCCAAACACCGCAGAAAGACCGGTGGCTCCCACTCTGAAGAGGTGAGCAGCATTGAGTGGGATTTCATAAACATGACAGAACAAGAAGAAGATTTAATTCACAGAATGTACAGACTTGTTGGAGACAGGTGGGGTCTGATAGCTGGGCGTATACCAGGAAGAAGAGCCGAAGAGATAGAGAGGTTTTGGATGATGACATATGGACACGTGTTTGCCAGCAAACGAGAAGAGCTTAGAAATACTAGACGATATGGCTTCTCCGATGATCGGAACCCTAGAAGGGATGGCACTCTCAGACTGATGAAGTCGACCAATCGCAGCGAAGCAATTGGAGGCAGAAACCATAACAAGGTGAATCAAGCAGATTGA 372 0.4677 MAKHRRKTGGSHSEEVSSIEWDFINMTEQEEDLIHRMYRLVGDRWGLIAGRIPGRRAEEIERFWMMTYGHVFASKREELRNTRRYGFSDDRNPRRDGTLRLMKSTNRSEAIGGRNHNKVNQAD 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1339 123 Gene3D - 26 67 - -
Bisa06g1339 123 Pfam Myb-like DNA-binding domain 26 65 IPR001005 -
Bisa06g1339 123 MobiDBLite consensus disorder prediction 103 123 - -
Bisa06g1339 123 SUPERFAMILY Homeodomain-like 27 67 IPR009057 -
Bisa06g1339 123 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 84 - -
Bisa06g1339 123 FunFam MYB-like transcription factor 25 67 - -
Bisa06g1339 123 SMART sant 22 70 IPR001005 -
Bisa06g1339 123 CDD SANT 25 66 IPR001005 -
Bisa06g1339 123 MobiDBLite consensus disorder prediction 85 102 - -
Bisa06g1339 123 MobiDBLite consensus disorder prediction 85 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1339 Bisa-ChrBisa06 47866990 47870339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1339 25 64 MYB Transcription Factor Family AT5G14750 55.000 3.50e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa06g1339 Myb_DNA-binding 7.9e-06 CL0123