Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1316 ATGAAAGAAAGGAAGTTCTCAGAACAGAAAATTATCACAAGTAAGTATGTGAAGAATGGGTTTCCCGAGACGCCAAGAGTGGTTCGAATTTCCGTCACAGACAACTACGCGACTGATTCTTCGAGCGACGAAAAAGACGAGCGATTCTTTCACCGACGCACCAGAGTGAAGAAGCTGGTTCACGAGATCAGAATCGAGGATTTCTCGACCTTCGTGGCTAAGAGAGAGGCTAACGGCCACTCAAAAACGGCGTCGTTGGAGCAGAAGCCGAAGCCGAAGGGGAAATCTACTACGGTCACGAAAACGAAACAGAGTCTTCCGAACGGGAAGAAGTTTCGCGGAGTCCGGCAGCGGCTGTGGGGGCGGTGGGCGGCGGAGATCCGGGACCCGTTCCGGCGAGCTCGGAAGTGGCTCGGAACGTTCGATACGGCGGAGGAAGCGGCTCTGGTTTACGACAGAGAAGCGATTCGTCTCAGAGGTCCCGATGCTCTGACGAATTTAATCAAACCGCCAGAGAAATCGGAATCTCTTGTGCTTCCCTTGAGCGTATACCATGAACCGCGAGAATTTGAGAAAAGGCCGGTGACTGTGAAGAACGAGTGGTCGGAGAACGATTGTGTCTGCGATTCAAACAAAGAGTCACGCGATGTGTTATCGTCGTCTTCTTCCTCGCCGACCTCTGTTCTCAGATATGACGGTGGGTCTCGTGAACCTGCTGGTTGGGCGGCGATGGGAGAGTTGAGGGAAGAAGAAGAAGAAGAAGAAATGTTTTCGTTCCCAGATTCTTCTTCGGCTTTTGTGAGCTGTTATTCGGATTATGAAAATCTTACCTCAACGTATTTCATTGAATCCAGTTTACCACAATCGATTTCCAATGACATTTTGAGAGATATTCCCTTTCATCTCGACGATGATTTTGAATCTTCGAAATGGTTTGTTGATAGCTACTTTCAAGACCCTTTGCCTCTGCAATGA 975 0.4913 MKERKFSEQKIITSKYVKNGFPETPRVVRISVTDNYATDSSSDEKDERFFHRRTRVKKLVHEIRIEDFSTFVAKREANGHSKTASLEQKPKPKGKSTTVTKTKQSLPNGKKFRGVRQRLWGRWAAEIRDPFRRARKWLGTFDTAEEAALVYDREAIRLRGPDALTNLIKPPEKSESLVLPLSVYHEPREFEKRPVTVKNEWSENDCVCDSNKESRDVLSSSSSSPTSVLRYDGGSREPAGWAAMGELREEEEEEEMFSFPDSSSAFVSCYSDYENLTSTYFIESSLPQSISNDILRDIPFHLDDDFESSKWFVDSYFQDPLPLQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1316 324 PIRSF PTI6 1 286 IPR017392 GO:0003700
Bisa06g1316 324 MobiDBLite consensus disorder prediction 214 235 - -
Bisa06g1316 324 MobiDBLite consensus disorder prediction 214 230 - -
Bisa06g1316 324 SMART rav1_2 111 174 IPR001471 GO:0003700|GO:0006355
Bisa06g1316 324 MobiDBLite consensus disorder prediction 90 107 - -
Bisa06g1316 324 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Bisa06g1316 324 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Bisa06g1316 324 MobiDBLite consensus disorder prediction 79 108 - -
Bisa06g1316 324 Pfam AP2 domain 111 160 IPR001471 GO:0003700|GO:0006355
Bisa06g1316 324 CDD AP2 110 166 IPR001471 GO:0003700|GO:0006355
Bisa06g1316 324 FunFam Ethylene-responsive transcription factor 2 110 169 - -
Bisa06g1316 324 SUPERFAMILY DNA-binding domain 111 167 IPR016177 GO:0003677
Bisa06g1316 324 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 233 - -
Bisa06g1316 324 Gene3D AP2/ERF domain 110 168 IPR036955 GO:0003700|GO:0006355
Bisa06g1316 324 ProSiteProfiles AP2/ERF domain profile. 111 168 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1316 Bisa-ChrBisa06 47402474 47403448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1316 5 231 AP2-EREBP Transcription Factor Family AT4G27950 44.255 3.42e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g1316 AP2 9.9e-12 CL0081