Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1264 ATGGTGTCGGTGAATCCGAACCCAGCTCAAGGCTTTTACTTCTTCGATCCCACCAATATGGGTCTTCCCGGCGTCAATATCCCGCCGCAGCCCCCCGCCGCCGCTACGGCTTCGTCGTCCACAGCCAGCGTTAGTACGTCGTCGTACGGGGATGATCCAAATAAGAAGATCCGGAAACCGTATACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGGGACTGGAAGAAGATTGAAGCATTTGTCGGTTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTCCTGAAAGTTCAGAAGAATGGAATGAGTGAACATGTACCTCCCCCTCGGCCAAAGAGAAAAGCTGCTCACCCATACCCACAAAAAGCACCTAAAAGTGAAGCTCCAGCAGTATCCCAAGTTGCAAGGCCATTGCAATCCTCATCTGCTTTCACTGAACCTGCAAACATCTATGGGGCAGACTCTTCATCGGTGCCTGGAACTCCAGTTACCAGTGTGCCTTTGTCAAATTGGAGTCACAATGTTATGCCGGTAGCCAATGTGCCACAAGTGACTAAAGATGACATGGGATTGGCTGGGCAAGCTGCTTCTCTTAATTGTTGCTATAGCAGTAGCAAAGGGATTGATCAAGGGGACCTGGGCAAGCCAATTAAAGTAATGCCAGATTTTGCACAAGTCTATAGCTTCATTGGCAGTGTGTTTGATCCAAACGCAACAAATCACTTACACAGACTGAAACAGATGGACCCTATAAATGTGGATGCAGTATTGTTATTGATGAGAAACCTCTCCATTAATTTAATGAGTCCTGAATTTGAAGATCATAGAAGGTTGCTTTCATCATACAATCCTGACACCGAGAAGGCAAAGTCTGGTAGTCTTTGCGGCAATCCTCTGATGGATAAATCTGAGAGTGCTGTTCTGTCTGCTTAA 987 0.4671 MVSVNPNPAQGFYFFDPTNMGLPGVNIPPQPPAAATASSSTASVSTSSYGDDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGMSEHVPPPRPKRKAAHPYPQKAPKSEAPAVSQVARPLQSSSAFTEPANIYGADSSSVPGTPVTSVPLSNWSHNVMPVANVPQVTKDDMGLAGQAASLNCCYSSSKGIDQGDLGKPIKVMPDFAQVYSFIGSVFDPNATNHLHRLKQMDPINVDAVLLLMRNLSINLMSPEFEDHRRLLSSYNPDTEKAKSGSLCGNPLMDKSESAVLSA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1264 328 CDD SANT 69 112 IPR001005 -
Bisa06g1264 328 PANTHER SWI/SNF COMPLEX-RELATED 35 286 - -
Bisa06g1264 328 MobiDBLite consensus disorder prediction 119 148 - -
Bisa06g1264 328 Gene3D - 70 117 - -
Bisa06g1264 328 SMART sant 66 114 IPR001005 -
Bisa06g1264 328 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Bisa06g1264 328 MobiDBLite consensus disorder prediction 26 59 - -
Bisa06g1264 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa06g1264 328 ProSiteProfiles SANT domain profile. 65 118 IPR017884 -
Bisa06g1264 328 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa06g1264 328 FunFam protein REVEILLE 6 isoform X1 69 117 - -
Bisa06g1264 328 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa06g1264 328 MobiDBLite consensus disorder prediction 32 51 - -
Bisa06g1264 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 65 114 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1264 Bisa-ChrBisa06 44848027 44854690 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa06g1264 Myb_DNA-binding 2.7e-11 CL0123