Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1253 ATGGCGGGAGTAAGGTTTTCCTTTTTAAAATGTCTCCGGAGTTCTTCAGTCAAGGGTTCTGTGAATGTGGAATTAATTCAATCACACCGTCATGTTATGAACCTTACAAGATATGCTGATCGCACTCATGTAAAATTTCCAAGTAATTCAGTGAATCAAGCTTATTCCAAAGAGGAGTTACAATTACCTGTATTTTTTGCTAGGAACTTTAGAACCTTGACTTCTGAAAACAGCAACCTCCTTAATATCAAATCCGATGCTTCATTTCCTCCTAAGTTTTCTAGCTTTTGTTTCCATAGTGCTCTTCCTTTTGCTTCAATGACCCACTTGTTGAACCATCGATCATATTCATCATCTCTAAGTGGCAAAGGAAGTGGAGATGAGGGCAAAGAAGTTTCTGCTAATTTTGGGGCAAGTGACATGAATGCCAGTAGTGATTCCATTGGTGCAAGTGATTGGGTGGATAATATTAAAAGTGCATGGCCGAGTGCGGTAGACACAGTAACACATACTGGGCAAAAGGTTAAAGAGGCCTCTGATGAGTTGATTCCATATGCTCAGCAGCTGCTCGATTCACACCCATATCTTAATGATGTGGTTATTCGAGTTGGTGGTACATTGACTGCTACGCTAATAGCATGGATTGTGATGCCTCGAATTTTGAGGAGGTTTCACAAATATGCAATGCAAGGTCCTGCATCATTATTTCCTGGAGGGATATCTAGGGAGCAAATTCCTTATGAGAAAAGCTTTTTGGGTGCTTTGGAGGATCCAGTGCGATATTTAGTTACTTTCATGGCATTCTCACAGATTGGTGTTATGGTAGCTCCAACAGCTATAGCATCACGGTACCTTGAACAGGCTTGGAGGAGTGCAGTGATCCTTTCATTTGTATGGTTTTTGCATCGATGGAAAACAAATGTTTTGGCTAATTTGTCCACTCAAAGTTTACTTGGGCTTGATCGGGATAAACTACTTACTCTAGACAAAATTTCATCTGTTGGTCTATTTGGGATTGGTATCATGGCTTTAGCTGAGGCTTGTGGTGTGGCTGTGCAATCTATTGTGACTGTTGGTGGTATAGGAGGAGTAGCCACTGCTTTTGCTGCCAGAGACATTCTTGGGAATGTACTCAGTGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCAGTAGAGGGTCAAGTTGTGGAAATGGGACTTACTACCACGTCATTGCTGAATGCTGAGAAGTTCCCAGTTCTAGTGCCAAATTCACTTTTCTCCAGTCAGGTTATAGTGAATAAGTCTCGCGCTGAATGTCGTGCCATCATCTCTAAAGTTCCTCTGCAAATTGAGGATTTAAATAGAATACCCAAGATATCAGATGATATAAAGAGCATGCTAAGATCAAATGCAAAGGTTTTCTTAGGAAAAGAGGCTCCGTACTGTTACTTGTCACGCATTGAAAATTCATATGCAGAATTGACTCTTGGATACAATCTGAAAAACATGCGTAAAGATGAGTTGTACTCTGCAGAGCAAGACATTCTCATGCAGACAGTCCAGATTATTAAGAAGCATGGTGCTGCACTTGGCAATACCTGGAAAAACATTTCCTCTGGTTCAGACATGTAG 1641 0.4083 MAGVRFSFLKCLRSSSVKGSVNVELIQSHRHVMNLTRYADRTHVKFPSNSVNQAYSKEELQLPVFFARNFRTLTSENSNLLNIKSDASFPPKFSSFCFHSALPFASMTHLLNHRSYSSSLSGKGSGDEGKEVSANFGASDMNASSDSIGASDWVDNIKSAWPSAVDTVTHTGQKVKEASDELIPYAQQLLDSHPYLNDVVIRVGGTLTATLIAWIVMPRILRRFHKYAMQGPASLFPGGISREQIPYEKSFLGALEDPVRYLVTFMAFSQIGVMVAPTAIASRYLEQAWRSAVILSFVWFLHRWKTNVLANLSTQSLLGLDRDKLLTLDKISSVGLFGIGIMALAEACGVAVQSIVTVGGIGGVATAFAARDILGNVLSGLSMQFSKPFSIGDTIKAGSVEGQVVEMGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAECRAIISKVPLQIEDLNRIPKISDDIKSMLRSNAKVFLGKEAPYCYLSRIENSYAELTLGYNLKNMRKDELYSAEQDILMQTVQIIKKHGAALGNTWKNISSGSDM 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1253 546 SUPERFAMILY Sm-like ribonucleoproteins 372 437 IPR010920 -
Bisa06g1253 546 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 153 536 - -
Bisa06g1253 546 Gene3D - 284 387 - -
Bisa06g1253 546 Gene3D - 388 436 IPR023408 -
Bisa06g1253 546 Pfam Mechanosensitive ion channel 330 531 IPR006685 GO:0016020|GO:0055085
Bisa06g1253 546 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 287 371 IPR011014 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1253 Bisa-ChrBisa06 44701553 44725433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1253 99 539 Mechanosensitive Ion Channel Family AT4G00290 65.611 0.0 585