Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1245 ATGGGAGGTTGCTGCTGTTCTGCCAGAAAACCTCATCTGCATGGAACACCAGTTTATTACTATTGCCCACCAGCTTTGGAAGAGCGTGAGTCATTAACCTCTAATGATGGCACGGCTGTTTCACTCTCTGCTGGATTGCTGCTAGGTTTGAACCTGGAAACGTCTACACCTGATACATACCAGCCCCCTCCTGCACCTTTGCCATATGATGTGGTCTTGGGTCCGGTATCAACCGATTCAGAATCTGGAAAAAGAACAGTCAGTGGTAGTAGTTTTGAAACCTTAATTACATATGAAGATCTTGAAGAATCAGATAGCAAATCACAAGCTAATCCTGAAGTATTATCTCCGAAGAAGATAGAACTATCAAAATCAAATGAATCTCATGCATTAATGACAGAAGAAGAGGAAGTCTGTCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCTAAAAATCTGACAAAGTGTGAGCACCACTTTCACCTATCTTGCATTCTTGAATGGATGGAAAGAAGTGACTCCTGTCCTATATGTGATCAGGAGATGATATTTGACTAG 561 0.4118 MGGCCCSARKPHLHGTPVYYYCPPALEERESLTSNDGTAVSLSAGLLLGLNLETSTPDTYQPPPAPLPYDVVLGPVSTDSESGKRTVSGSSFETLITYEDLEESDSKSQANPEVLSPKKIELSKSNESHALMTEEEEVCPICLEEYDVENPKNLTKCEHHFHLSCILEWMERSDSCPICDQEMIFD 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1245 186 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Bisa06g1245 186 FunFam Putative E3 ubiquitin-protein ligase RHB1A 115 184 - -
Bisa06g1245 186 Pfam Ring finger domain 139 179 IPR001841 -
Bisa06g1245 186 SUPERFAMILY RING/U-box 131 185 - -
Bisa06g1245 186 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 38 185 - -
Bisa06g1245 186 SMART ring_2 139 179 IPR001841 -
Bisa06g1245 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 184 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1245 Bisa-ChrBisa06 44367972 44371442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1245 1 186 C3H Transcription Factor Family AT4G00335 59.358 3.28e-74 219