Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1229 ATGGGAGAAGTTGTGGAGGAGCCTAATCCAAGTGTGGTTGAAGAGAAAATTTATGTTGCTGTGTCCAATGAGGTGAAAGATTGCAAAATAAATCTGATATGGGCGATACAAAATTCTGGAGGAAGGAAGATTTGTATCCTTCACGTTCATGTGCCTCCAACTATGATCCCTATGATGGGTGCTACGTTTCCAGCAAGTTCGCTGAAAGAACCTGAAGTCGAAGCATACAGGGAAATAGAAAAGCAAAACATGCATAAAAGCCTGGATGAATATCTTCAAATCTGTCAACGGATGGGAGTAGAAGCAGAGAAATTGCATGATGAAATGGAATGCATTGAGAAAGGGATTGTAGCACTAGTGTCCAAGTATGAAATCCGGAAGCTAGTTATGGGAGCAGCATCTGACAAGTACTATTCTAGGAAAATGATGGAAATCAGATCTAGGAAAGCCATTTATGTCCGTGATCACGCTGAAGATTTTTGTCATATACAATTTATCTGCAAAGGACACCTTATACAAACAAGGGACTGCAGTTTGGATATAGGTGATGCAGCCGTTGTATCTCCATTGCTGCAGCAAAGGCCAAGCCCTGAAGTTGGACGTTCACCCCACTTGAGATCTCAAACTTTTGTACTTGGGCAGAATCATTCAGTAAAACTCACAAATCCAGCTCAAGATCTATTTCGCAGGGTAAGGTCTGCCAATGATAGACACAGAAGGAGCATAGAAACTGTTTCTTCTCCAGGTGGCACTGAAGGATTGTCAACTCCACAGAATAGATTGGGTACGGAAGGAAGTTTTGATGAGTCAGAAGGGCTGTCAAGAACGAGTCCTTCAGTTTTTTCTGATAGTGGTGAAGTGGAAGCAGCTTTGACCCCAGATTTGATCACTCAGAGGAGTGAGAGTGTATTAGACTTGAGTGGAATCTCTCTGAGTAAAGCAGAGCTTCGTCATCCATCTCCTCCCAGTGTACTGGAGGGAGGAATGGACTATAATCTCTATGATCAACTTGAACAGGCAATGGGTGAGGCTGAGAATGCTAGGCATGAAGCATACCAAGAAACTGTTAGACGTGAGAAAGCTGAAAAAGATGCTGTTGATGCTATACGCAGGGCTGAATCCGCTGAAAGCTTATATACAGAAGAGTTGAAACTGAGGAAGGAGGTAGAGGAAGCACTAGAAAAAGCAAAAGAAGAACTTGGACAGATGAAAAGCCAGAGAGATAAAGTAAATGAGGAACTCCAACTTGCCTTAGATCAGAAGTCATTGCTAGAGAGTCAAGTTGCATCATCAGAACTTATGGTAGAAGAGTTGGAGCAGAAGATTGTATCTGCTGTGGATCTGTTGCAAATTTACAAGAAAGAACGAGATGAGCTGCAGATGCAGCGTGAAAATGTATTGAGAGAGGCTGAGGAGTTGAGGAAAAAACCAGCAGAGGCCTCAAGCATGCATAAACCTCAATTTTTCTCAGAATTCTCTTTTCCAGAGATTGCAGAAGCAACAGATAACTTCAATCCAACCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATATAAGGGTGTCTTACGTCACACTTGGGTGGCTATCAAAATGTTGCACCCTAACAGCTTGCAAGGCCCTTCAGAATTTCAACATGAGGTTGACGTATTGAGTAAGTTGAGGCATCCCAATCTTATTACATTCATGGGAGCCTGTCAAGAATCCTGGACTCTTGTCTATGAATATTTACCCAATGGAAGCCTTGAAGATCGGCTCAGCTGCAAGGATAACATGCCTCCATTATCATGGCAAACTCGAATTTGCATTGGTGCAGATGTCTGCTCTGCTCTCATCTTTCTTCATTCCAGTAAACCTCACAGTGTAGTGCATGGTGACTTAAAACCCTCAAATATTCTCCTTGATGCTAACCTTGTTAGCAAGCTTAGTGACTTTGGAATATGTCGTGTATTACCGTCTCATGAGAGTTCAACTAACAATACTACAGAGTGCCGGAGAACTGACCCAAAGGGCACTTTATGCTACATGGATCCTGAATTCCTTGCTTCAGGGGAACTTACTCCGAAGTCGGATATATATGCATTTGGAATCATATTATTAAGATTGCTGACTGGAAGACCAGCCTTGGGAATAAGGCAGGAGGTGCAATATGCATTAGATGCTGGAAAGTTGGATTCCCTCTTGGATCCTTTGGCCGGAGACTGGCCATTTGTGCAGGCTGAACAGTTGTGTCACTTGGCATTGAGGTGTTGCGATATGAACCGAAAGAGCCGGCCAGACCTTTATTCAGATGTCTGGAGGGTATTGGAACCGATGAGGGCTTCTTCTGGAGGCACAAGTTCCTTAAGATTGGGATCAGAAGGGCTTTGCAAACCCCCAACATATTTCAATTGTCCAATCTTCCTGGAAGTCATGAAAGATCCGCATGTTGCTGCCGATGGTTTTACTTACGAAGCTGAGGCCATTCGAGGATGGCTGGACAGTGGTCATGAAACTTCACCAATGACAAATTATAAGCTTGCACATTGCAGTCTTGTACCTAACCATGCTCTTCGCTCTGTAATCCAGGACTGGCTTGAAAATCATTGA 2589 0.4326 MGEVVEEPNPSVVEEKIYVAVSNEVKDCKINLIWAIQNSGGRKICILHVHVPPTMIPMMGATFPASSLKEPEVEAYREIEKQNMHKSLDEYLQICQRMGVEAEKLHDEMECIEKGIVALVSKYEIRKLVMGAASDKYYSRKMMEIRSRKAIYVRDHAEDFCHIQFICKGHLIQTRDCSLDIGDAAVVSPLLQQRPSPEVGRSPHLRSQTFVLGQNHSVKLTNPAQDLFRRVRSANDRHRRSIETVSSPGGTEGLSTPQNRLGTEGSFDESEGLSRTSPSVFSDSGEVEAALTPDLITQRSESVLDLSGISLSKAELRHPSPPSVLEGGMDYNLYDQLEQAMGEAENARHEAYQETVRREKAEKDAVDAIRRAESAESLYTEELKLRKEVEEALEKAKEELGQMKSQRDKVNEELQLALDQKSLLESQVASSELMVEELEQKIVSAVDLLQIYKKERDELQMQRENVLREAEELRKKPAEASSMHKPQFFSEFSFPEIAEATDNFNPTLKIGEGGYGSIYKGVLRHTWVAIKMLHPNSLQGPSEFQHEVDVLSKLRHPNLITFMGACQESWTLVYEYLPNGSLEDRLSCKDNMPPLSWQTRICIGADVCSALIFLHSSKPHSVVHGDLKPSNILLDANLVSKLSDFGICRVLPSHESSTNNTTECRRTDPKGTLCYMDPEFLASGELTPKSDIYAFGIILLRLLTGRPALGIRQEVQYALDAGKLDSLLDPLAGDWPFVQAEQLCHLALRCCDMNRKSRPDLYSDVWRVLEPMRASSGGTSSLRLGSEGLCKPPTYFNCPIFLEVMKDPHVAADGFTYEAEAIRGWLDSGHETSPMTNYKLAHCSLVPNHALRSVIQDWLENH 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1229 862 PANTHER OS02G0152300 PROTEIN 17 857 - -
Bisa06g1229 862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 791 862 IPR013083 -
Bisa06g1229 862 CDD RING-Ubox_WDSUB1-like 793 848 - -
Bisa06g1229 862 SUPERFAMILY RING/U-box 787 861 - -
Bisa06g1229 862 MobiDBLite consensus disorder prediction 232 286 - -
Bisa06g1229 862 Coils Coil 358 476 - -
Bisa06g1229 862 Gene3D Transferase(Phosphotransferase) domain 1 577 776 - -
Bisa06g1229 862 SMART Ubox_2 795 858 IPR003613 GO:0004842|GO:0016567
Bisa06g1229 862 ProSiteProfiles Protein kinase domain profile. 504 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1229 862 Gene3D Phosphorylase Kinase; domain 1 481 576 - -
Bisa06g1229 862 ProSiteProfiles U-box domain profile. 791 862 IPR003613 GO:0004842|GO:0016567
Bisa06g1229 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Bisa06g1229 862 Pfam Protein kinase domain 509 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1229 862 SMART serkin_6 504 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1229 862 Coils Coil 334 354 - -
Bisa06g1229 862 CDD STK_N 16 169 - -
Bisa06g1229 862 SUPERFAMILY Protein kinase-like (PK-like) 483 765 IPR011009 -
Bisa06g1229 862 FunFam receptor-like protein kinase FERONIA 468 576 - -
Bisa06g1229 862 ProSitePatterns Protein kinases ATP-binding region signature. 510 531 IPR017441 GO:0005524
Bisa06g1229 862 MobiDBLite consensus disorder prediction 244 283 - -
Bisa06g1229 862 Pfam U-box domain 793 862 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1229 Bisa-ChrBisa06 43927715 43938060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1229 4 862 U-box Gene Family AT2G45910 53.873 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bisa06g1229 Pkinase 2.3e-41 CL0016