Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1228 ATGGTTGAAGAGAAAATTTACGTTGCTGTGTCTAAAGAGGTGAATGATTTTCAGTTAAATCTGAAATGGGCGATACAGAATTCTGGAGGAAGGAAAATTTGCATCCTTCACGTTCATGTGCCTCCAACATTGATCCCTTTGTTGGGTGCTAAGTTTCCAGCAAGTTCACTGCAAGAACCGGAAGTTAAAGCATACAGGGAAGTAGAAAGGAAAAACACGCATGCATTGCTGGATGACTATATTCGATTTTGTCAGCGGATGGGAGTGCGAGCAGAGAAATTGGATTCTGAAATGGAATGCATTGAGAAAGGAATCGTAGCGCTGGTGTCCAAGTATGGAATCCGGAAGCTAATTATGGGAGCAGCACAATATAAGTACTATTCTAGGAAAATGACGGTAATCAGATCCCGGAAAGCCATCTATGTACGAGACCATGCTGAAGATTTTTGTCATATACAATTTATCTGCAATGGACACCTTATATACACAAGGAACTGCAGTTTAGATATAGGTAATGCAGAGGTTGCATCTCCTTTGCTGCAGCAAAGGCCAAACCCTGAAGTTGGACGTTCAGCCCACTCAAGATCTCAATCCGTCACACTCGAGCAGAATCGCCTTGTAAAACTAACAAATCTGGCTCAAGATCTATTTCGCAGAGTAAGGTCTGCCAATGATGGAGGTAGAGGGAGCTTAACAACTATTACTTCTCCAGATGGCACTGAAGGATTGTCAACTCCACAGAACATGTTGGGTACAGAAGGAAGTTTTGACAAGTCAGAAAGGCGTTCAAGAAGGAGTTTTTCATTTTCTCCAAAATTCATTGATAGTGGCGAAGTGGAAGCAACTTTGCCCCAAGATTTGATCACTCAGAGGAGCGAGAATATATTAAACTTGAGTGGAATTTCTCTGAGTAAAGCAGATCTTTGTCATTCATCTCCTCCCAGTGTATTGGATGGAGGAATAGACTGTACTCTCTATGATCAACTTGAACAGGCAATGGGTGAGGCTGAGAAGGCTAGGCAGGAAGCATACCAAGAAACTGTTAGGCGTGGGAAAGCTGAAAAAGATGCCATTGAGGCTATACGCAGGGCTAAAGCTGCCGAAAGCTTATATACAGAAGAGTGGAAATGGAGGAAGAAAGTTGAGAAAGCACTAGAAAAAGCAAAAGAAGAACTTGGAATGATGAAGAGCCAGAGAGATAAAGTAAATGAAGAACTTCAACTTGCTCTAGATCAGAAGTCATCACTAGAGAGTCAAAATACATCATCAGAACTTATGGTGAAGGATTTGGAGCGGAAAATTATATCTTCTGTGGGTTTGTTACAAAGTTACAAGAAAGAACGAGATGAGCTTCAGATGCAGCGTGATAATGCACTTAGAGAGGCTGAGGCGTTGAGGAAAACCCCAGCAGAGGCCTCAAGCATGCATGTGCCTCACTTTTTCTTAGAATTCTCTTTTCTAGAGATTGAAGAAGCAACAGATAACTTCAATCCAACCCTAAAGATTGGAGAAGGTGGATATGGAATTATATATAAGGGTATCCTACGTCACACTCAGGTGGCTATCAAAATGTTGCACCCTAACAGCTTGCAAGGTCCTTCAGAATTTCAACACGAGGTTGACATATTGAGTAAGTTGAGGCATCCCAATCTTATTACATTAATGGGAGCCTGTCAAGAATCCTGGACTCTTGTCTATGAATATTTACCCAATGGAAGCCTTGAAGATAGGCTCAGCTGCAAGGATAACACGCCTCCATTATCATGGAAAACTCGAATTCGCATTGCTGCAGAGCTCTGCTCTGCTCTTATCTTTCTTCATTCCTGTAAACCTCACAGCGTAGTGCATGGTGACTTAAAACCCTCAAATGTTCTCCTTGATGCAAACCTTGTTAGTAAGCTTGGCGACTTTGGAATATGTCGTATATTATCTCTTTATGAGGGTTCAAGTAACGATGCTACAGCGTATTGGAGAACTGACCCGAAGGGCACTTTATGCTACATGGATCCTGAATTCATTGCTTCAGGGGAACTTACTCCAAAGTCTGATATATATTCATTTGGAATCATATTATTAAGGTTGTTGACTGGGAGACCAGCTGTGGGAATAAGGCAGGACGTGCAATGTGCATTAGATGCTGGAAAGTTGAAATCCCTCTTGGATCCTTTGGCTGGAGACTGGCCATTTGTGCAGGCTGAACAGTTATGTCGCATGGCATTGAGGTGTTGTGATATAAACAGAAAGAGCCGGCCAAACCTTTGTTCAGACGTCTGGAGGTTACTGGAACCAATGAGGGCTGCTTATGGAGGCACAAGTGCTTTCAGCTTGGGTTTGGAAGGGCTTTCCCAACCCCCAACATATTTCATTTGTCCAATCTTCCAGAAAGTCATGCAATATCCGCATGTTGCTGCCGACGGTTTTACTTACGAAGCCGAGGCCATTCGAGGATGGCTGGACAGTGGTCGTGAAACTTCACCAATGACAAATGATAAGCTTGCACATCACAATCATGTCCCCAATCATTTTCTTCGCTCTGCAATCCAGGACTGGCTTCAAAGTCACTGA 2565 0.4288 MVEEKIYVAVSKEVNDFQLNLKWAIQNSGGRKICILHVHVPPTLIPLLGAKFPASSLQEPEVKAYREVERKNTHALLDDYIRFCQRMGVRAEKLDSEMECIEKGIVALVSKYGIRKLIMGAAQYKYYSRKMTVIRSRKAIYVRDHAEDFCHIQFICNGHLIYTRNCSLDIGNAEVASPLLQQRPNPEVGRSAHSRSQSVTLEQNRLVKLTNLAQDLFRRVRSANDGGRGSLTTITSPDGTEGLSTPQNMLGTEGSFDKSERRSRRSFSFSPKFIDSGEVEATLPQDLITQRSENILNLSGISLSKADLCHSSPPSVLDGGIDCTLYDQLEQAMGEAEKARQEAYQETVRRGKAEKDAIEAIRRAKAAESLYTEEWKWRKKVEKALEKAKEELGMMKSQRDKVNEELQLALDQKSSLESQNTSSELMVKDLERKIISSVGLLQSYKKERDELQMQRDNALREAEALRKTPAEASSMHVPHFFLEFSFLEIEEATDNFNPTLKIGEGGYGIIYKGILRHTQVAIKMLHPNSLQGPSEFQHEVDILSKLRHPNLITLMGACQESWTLVYEYLPNGSLEDRLSCKDNTPPLSWKTRIRIAAELCSALIFLHSCKPHSVVHGDLKPSNVLLDANLVSKLGDFGICRILSLYEGSSNDATAYWRTDPKGTLCYMDPEFIASGELTPKSDIYSFGIILLRLLTGRPAVGIRQDVQCALDAGKLKSLLDPLAGDWPFVQAEQLCRMALRCCDINRKSRPNLCSDVWRLLEPMRAAYGGTSAFSLGLEGLSQPPTYFICPIFQKVMQYPHVAADGFTYEAEAIRGWLDSGRETSPMTNDKLAHHNHVPNHFLRSAIQDWLQSH 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1228 854 Coils Coil 378 433 - -
Bisa06g1228 854 SUPERFAMILY Protein kinase-like (PK-like) 474 759 IPR011009 -
Bisa06g1228 854 Coils Coil 326 346 - -
Bisa06g1228 854 FunFam receptor-like protein kinase FERONIA 460 568 - -
Bisa06g1228 854 CDD STK_N 5 158 - -
Bisa06g1228 854 CDD STKc_IRAK 502 764 - -
Bisa06g1228 854 MobiDBLite consensus disorder prediction 227 263 - -
Bisa06g1228 854 Gene3D Transferase(Phosphotransferase) domain 1 569 771 - -
Bisa06g1228 854 Pfam U-box domain 785 854 IPR003613 GO:0004842|GO:0016567
Bisa06g1228 854 Coils Coil 441 468 - -
Bisa06g1228 854 ProSitePatterns Protein kinases ATP-binding region signature. 502 523 IPR017441 GO:0005524
Bisa06g1228 854 ProSiteProfiles Protein kinase domain profile. 496 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1228 854 CDD RING-Ubox_WDSUB1-like 785 840 - -
Bisa06g1228 854 Pfam Protein kinase domain 501 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1228 854 SMART serkin_6 496 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1228 854 MobiDBLite consensus disorder prediction 227 254 - -
Bisa06g1228 854 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 782 854 IPR013083 -
Bisa06g1228 854 Gene3D Phosphorylase Kinase; domain 1 474 568 - -
Bisa06g1228 854 SMART Ubox_2 787 850 IPR003613 GO:0004842|GO:0016567
Bisa06g1228 854 ProSiteProfiles U-box domain profile. 783 854 IPR003613 GO:0004842|GO:0016567
Bisa06g1228 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Bisa06g1228 854 PANTHER OS02G0152300 PROTEIN 6 849 - -
Bisa06g1228 854 SUPERFAMILY RING/U-box 781 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1228 Bisa-ChrBisa06 43895798 43900946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1228 1 854 U-box Gene Family AT2G45910 53.248 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bisa06g1228 Pkinase 6.8e-41 CL0016