Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1209 ATGTTAAGTTATATGGAGGCTCGTCGACACTTGAAGCAGCTTCCAGCAAAGCACTCCACTCATACAACTGAACAATCTTTCATTCTCCCATGTGATCCCTTACAGATTGCAAACGAGGTTCTGGGGCGCAAATGTGGATCTTGTAAAGGCGTTTCTGGTTCCAACATATGTAAGTGGATACTACAGCGGTTGCGTACTTGCATGAGCTTTGGAGATATTGTGGCCAATCATAAAAGCACATTATGGAGGCATTGTACACTAGTGCTTAAGTGCTCCACACTTATGCCATGTTGTGTGAATTCACAAGTTAAGGCATCTGCTCTTGAAGCTCCAGATGCCGTAAAAGAGGATACAAGTGCGGCCAGTAACTGGCCTGCATTCCGTGAATTTACATTTGAGCAACTTAAGAATGCAACATCTGGATTTGCTGTGGCGAATATTGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTACTGTTAAGCGGTTTAATAGAAATGCTTGGCCTGATGCTCGGCAGTTTTTGGAGGAAGCAAGATCAGTTGGTCAGCTCCGTAACCAAAGATTGGCAAATTTGCTTGGTTGCTGTTGTGAAGGTGACGAGAGGTTGCTTGTTGCAGAATATATGCCAAATGAAACACTTGCAAAACACCTATTTCATTGGGAAACACAACCAATGAAATGGGCAATGCGACTAAGAGTTGTTCTATATATTGCACAAGCTCTAGAATACTGCACAAGTAAAGGGCGTGCCCTCTATCATGACCTTAATGCATATAGGGTTCTTTTTGATGAGGATGGTAATCCAAGGCTTTCAAGTTTTGGCCTCATGAAGAATAGTAGGGATGGGAAAAGTTACAGCACAAATTTGGCATTTACCCCTCCAGAGTATCTAAGAACTGGGAGAGTTACACCAGAAAGTGTAATATATAGCTTTGGCACTCTTGTGCTTGATCTTCTCAGTGGGAAACATATCCCTCCAAGCCATGCCCTTGATTTGATTCGGGACAGAAATCTTCAGATGCTAACAGACTCCTGTTTGGAAGGACAGTTTTCTGATGACAATGGAACTGAGTTGGTACGGTTGGCATCTCGGTGTTTACAGTATGAACCTAGAGAACGGCCAAATCCCAAGTCATTAGTGGCTGCATTGGCTCCTCTTCAGAAAGAAACAGAGGTTCCTTCACATGTCTTGATGGGTGTCCCACACAGTGCTACTTTCACTTCATTGTCCCCTCTTGGTGAAGCATGCTCAAGAAAAGACTTGACGGCTATACATGAAGTTTTGGACAATCTTGGCTATAAAGATGATGAAGGAGTGGCAAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGACACACTAAATTGTAAGAAAAAGGGGGATGTCGCTTTCCGACAGAAAGATTTTCAACTTGCTATTGAGTGCTACACACAGTTCATTGATACTGGAACAATGGTTTCTCCAACAGTCTATGCACGGCGCAGTTTGTGTTATCTCATTAGCGACATGCCTCAGGAAGCACTGAATGATGCAATGCAAGCGCAAGTGATTTCCCCGGTATGGCACATTGCATCTTATCTTCAATCAGTTGCCCTTTCCGGTATCGGGATGGAGAATGAATCCCAAGTAGCAATTAAAGAGGGCACAACACTAGAAGCAAAGCGAAAAGTAGTTGCCGGACAAAAGTAA 1734 0.4314 MLSYMEARRHLKQLPAKHSTHTTEQSFILPCDPLQIANEVLGRKCGSCKGVSGSNICKWILQRLRTCMSFGDIVANHKSTLWRHCTLVLKCSTLMPCCVNSQVKASALEAPDAVKEDTSAASNWPAFREFTFEQLKNATSGFAVANIVSEHGEKAPNVVYKGKLENQMRITVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLYIAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLVLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDNGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGVPHSATFTSLSPLGEACSRKDLTAIHEVLDNLGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDVAFRQKDFQLAIECYTQFIDTGTMVSPTVYARRSLCYLISDMPQEALNDAMQAQVISPVWHIASYLQSVALSGIGMENESQVAIKEGTTLEAKRKVVAGQK 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1209 577 Gene3D Tetratricopeptide repeat domain 466 576 IPR011990 GO:0005515
Bisa06g1209 577 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 105 571 IPR045845 GO:0004672|GO:0009742
Bisa06g1209 577 Pfam Protein tyrosine and serine/threonine kinase 158 395 IPR001245 GO:0004672|GO:0006468
Bisa06g1209 577 Gene3D Phosphorylase Kinase; domain 1 116 220 - -
Bisa06g1209 577 FunFam probable serine/threonine-protein kinase At4g35230 466 574 - -
Bisa06g1209 577 Gene3D Transferase(Phosphotransferase) domain 1 222 414 - -
Bisa06g1209 577 SUPERFAMILY TPR-like 467 566 IPR011990 GO:0005515
Bisa06g1209 577 ProSiteProfiles Protein kinase domain profile. 145 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1209 577 SUPERFAMILY Protein kinase-like (PK-like) 122 405 IPR011009 -
Bisa06g1209 577 FunFam probable serine/threonine-protein kinase At4g35230 117 220 - -
Bisa06g1209 577 FunFam probable serine/threonine-protein kinase At5g41260 222 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1209 Bisa-ChrBisa06 42678641 42689647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1209 96 399 Glycoside Hydrolase AT3G07070 32.831 1.19e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa06g1209 PK_Tyr_Ser-Thr 4.3e-27 CL0016