Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1207 ATGGATCGAGGGGACCATATGGCATTCTCTGGTTCTGCATCTTACTATATGCAGAGAGGACTAGCTGGTTCTGGGGCACAACCTGAGTTACATGGTTCACACGGCATTCGTCCCCCAAATCCTAATCTATCATTTCAGCCTGGCATTGGAGGTGGTGGTTCCATTGGATCCACATTACCATTAGAATCGTCGGCAATTTCACCTCATGGTGTCAATGTGGGTGCTCCACCAGGGGTACCACCAGGGGAACCTGTGAAAAGGAAGAGAGGAAGGCCTCGGAAATATGGTCCGGATGGAAGTGTGTCATTGGCATTAACTCCATCATCATCTAGTCATCCGGGAGCCTTGACACAGAGCCAGAAGCGTGGCAGAGGTCGCCCTCCAGGAACTGGGAAGAAACAGCAGTTGGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCTGGGATGGGTTTCACTCCTCATATCATCACCATTGCAGTTGGAGAAGACATTGCAACAAAAATAATGGCATTTTCTCAGCAGGGGCCTCGAGCTGTATGCATTTTGTCAGCAAATGGTGCTGTCTCTAATGTGACACTTCGGCAGCCTTCAAGTTCGGGTGGCACTGTCACATATGAGGGGCGATTTGAGATATTATGCCTGTCAGGCTCTTACTTGCTCACTGAAAGTGGTGCCTCTCGCAATCGAACTGGCGGTCTAAGTGTTTCGCTTGCTAGTCCTGATGGCCGTGTCATCGGTGGAGGAGTTGGGGGATTACTTATTGCTGCAAGTCCTGTTCAGGTGATAGTTGGGAGCTTTCTTTGGGGTGGATCAAAGACGAAGAACAAGAAGAAGGAAGGCGGAGAAGAAGCAGAAGTTGCCATGGAATCAGATCACCAATCAGTTCACAATCCAGCGGCATTGAACACCATCTCTCCAACTCAAAATCTCACTCAAGCTTCATCCATGAGTCCCTGGCCTGCTTCTCGCCAATTGGACATGCGTAATTCCCATGTTGACATTGATCTAATGCTAGCAATGCCAGAATGGTAA 1032 0.4903 MDRGDHMAFSGSASYYMQRGLAGSGAQPELHGSHGIRPPNPNLSFQPGIGGGGSIGSTLPLESSAISPHGVNVGAPPGVPPGEPVKRKRGRPRKYGPDGSVSLALTPSSSSHPGALTQSQKRGRGRPPGTGKKQQLASLGELMSGSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAVCILSANGAVSNVTLRQPSSSGGTVTYEGRFEILCLSGSYLLTESGASRNRTGGLSVSLASPDGRVIGGGVGGLLIAASPVQVIVGSFLWGGSKTKNKKKEGGEEAEVAMESDHQSVHNPAALNTISPTQNLTQASSMSPWPASRQLDMRNSHVDIDLMLAMPEW 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1207 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 266 IPR005175 -
Bisa06g1207 343 SMART AT_hook_2 121 133 IPR017956 GO:0003677
Bisa06g1207 343 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Bisa06g1207 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 70 315 IPR039605 GO:0003680
Bisa06g1207 343 ProSiteProfiles PPC domain profile profile. 147 287 IPR005175 -
Bisa06g1207 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 269 - -
Bisa06g1207 343 MobiDBLite consensus disorder prediction 102 118 - -
Bisa06g1207 343 FunFam AT-hook motif nuclear-localized protein 1-like 153 284 - -
Bisa06g1207 343 Gene3D - 153 293 - -
Bisa06g1207 343 CDD DUF296 152 266 IPR005175 -
Bisa06g1207 343 MobiDBLite consensus disorder prediction 20 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1207 Bisa-ChrBisa06 42622912 42629365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1207 1 337 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 51.261 2.83e-88 267