Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1133 ATGAAAACACAGAAAAGTACGGAATTACAACAATGGATGTCCCGCCGTATGTTACCTTATTGGTTGAGGAAAAGGATCAGCCAATATGAATACTACAACAAAAAGCAAGAAAATAGGGGTGCAAAGGAGGAAACAATAATTCAAAACCTTCCTAAAGATCTCAGAAGGAACGTGCCAATGTTTGAGAAAATAGATGAAAAGTTGTTGGATGCACTATGTGATAGATTGAAGCCAGTACTTTATACAAAGAGCAAATTCATAGTTGGTGAAGGTGATCCCATTGATGAAATGCTCTTCATTACGCGTGGAGAACTAACTACCATGACGACAAATGGTGGAAGAACTGGCTTCTTCAACTCCTTTGTGATGAAGGCAGGTGACTTCTATGGAGAGGAGCTTCTAACATGGGCTTTGGACCCTAACTCATCCCCAAATCTTCCCATTTCAACCAGAACAGTGGAATCCACATCAGAAGTTGAAGCCTTTGCCCTCATGGCTAATGATTTGAAGTTTGTTACTTCCCAGTTCCGTCGCCTTAATAACAAACATATCCAGCACACTTTCAGGTACTATTCCTTACAATGGAGGACATGGGGTGCATGCTTCATACAAGCAGCTTGGCGTCACTATTGCAGAAGGAAAATTGAGAAATCACTACATGAAGCCGAAGATAAGCTACTAGATGCATTGGAAAATGAGGAAGGGTCAACGGCAAGTTTTATTGCCACCATATATGCGTCGAGGTTTGCAGCCAATGCACTACGAGACTTGCGAAAATATGACAAACATACCACTAGAATGCCTCAAAAATTACTGCCTCTGATGCCTCAGAAGCCAACAGAGCCTGATTTTACTTCTCAGGAACTATATGGGCATCATTGTTTTGGTGGCTTCTCTGTCTCACATTCGACCTTCATCTCGCATTCCTTATTCGATGGCTTCCCTTCTCCCTCAGTCGCCTCCCACAGCTGCCGGTGGCGATGGCCTTCCCTTCTCCCTCAGTCACCTCCTATAGCCGCCGGTAGCATTCAGCCGTCCTCCTCTTTCTTTGCCCCCAACATTGGACGAGAAATTGAAGAAATTGGTGTTATCAATACCTATCTCCTTGCTGAACTAGTTTCTTCTGTCATTGAAGGGATTGAATGTTGTGCTGTTTTTGCTGAGCTAAAATTTTGCTGCACTATAAAGGCTCTTCAAGTAGTGCTAGAATTTTGCTGGACTAGAAAGGATGATCAAGTAGTTTTGGAATTGTGTTAG 1257 0.4288 MKTQKSTELQQWMSRRMLPYWLRKRISQYEYYNKKQENRGAKEETIIQNLPKDLRRNVPMFEKIDEKLLDALCDRLKPVLYTKSKFIVGEGDPIDEMLFITRGELTTMTTNGGRTGFFNSFVMKAGDFYGEELLTWALDPNSSPNLPISTRTVESTSEVEAFALMANDLKFVTSQFRRLNNKHIQHTFRYYSLQWRTWGACFIQAAWRHYCRRKIEKSLHEAEDKLLDALENEEGSTASFIATIYASRFAANALRDLRKYDKHTTRMPQKLLPLMPQKPTEPDFTSQELYGHHCFGGFSVSHSTFISHSLFDGFPSPSVASHSCRWRWPSLLPQSPPIAAGSIQPSSSFFAPNIGREIEEIGVINTYLLAELVSSVIEGIECCAVFAELKFCCTIKALQVVLEFCWTRKDDQVVLELC 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1133 418 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 284 - -
Bisa06g1133 418 Gene3D Helix hairpin bin 1 60 - -
Bisa06g1133 418 Coils Coil 212 232 - -
Bisa06g1133 418 CDD CAP_ED 60 191 IPR000595 -
Bisa06g1133 418 Gene3D Jelly Rolls 61 178 IPR014710 -
Bisa06g1133 418 SMART cnmp_10 60 191 IPR000595 -
Bisa06g1133 418 ProSiteProfiles cAMP/cGMP binding motif profile. 60 143 IPR000595 -
Bisa06g1133 418 FunFam Cyclic nucleotide-gated ion channel 1 58 176 - -
Bisa06g1133 418 SUPERFAMILY cAMP-binding domain-like 4 184 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1133 Bisa-ChrBisa06 40406506 40411940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1133 5 288 Ion Channels AT5G53130 62.752 6.38e-117 355