Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1081 ATGATGTCAAGTCAAGGCCCTTCTGCGCCTGGCCTACTTGCTAAGGAAGTTATTAGAGACTCAAGACTCGTTTCGACAACTATGGCGGCTAATGTTCCTGCAAAGAGTCCCACGAGGTCTACGCCCGCGATTTCTCAGGACAAACGACACTGTTCAATATTCGAACTTCCACCGGACTTCTTCCACTCCTGTCGCCTCCTTCCCTCTGCTCAATCGTCCGTCTCTGAGCAAATTCAGAATCGCGATAATTCAGTCCTCGAAACCCTTGTCCCAAATGAGAAAGACGGTAGTGGCTCGCAACAGTTCGTCGTTTCGGTGCCTAAGTGGACCTGCAATACTTGCAAGACTCAATTTGAGTCTCTTCAGGACCAGCGATCGCATTTTAAATCCGATATTCATCGGTTCAACGTGAAGTTGACAGTGGCTGGAAAGGATATTGTGAAGGAAGAAGATTTTGAGCTGTTGACATCTGATTCTATTAAAGACTATGATGTCTCAAGTATATCAGGATCAGATGAAGATGGTGATAGCGAAACTGAGTCTCAAAATCAAAATGACGTGCATATCAAATTAAGTGAAAGTTTTAAGAAAAAGCTATTTATCAGTCTTGAGACGGGGCAGAGAGTTTCTATTTGGAAGTGCTTAATAATGAATATGACCGAGAATGTATTGTATGAAAATGAAAAGGCTCAGAATGAAGTGTTAGAGAGGTTGAAATCTTTGACTCTTGAGCCCAGGAATAATACCCACTTGAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCTGGCTGTGTGTTTGACGGTGATGCAGTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCCAAGGCAGGAAAAAAACAGTCATCAAAAGATGCTTCTGGCAGGGCTGCCCATTCTGCTGGGGCTTCACTTCGTCGTCATAATGAACTTGCATTAAAGAAGGAAATTCAAGAGCTGCTTACTGCTTGGAGAATTTATTTTGATGTTTCGAGTTGCACTTTCCTACATGCACCCTCAAGTAGTCGTCAATTGCTATTTGATGGAGAAAGACCTTATTTTAGCAATCAGCATCGTGTTATTAGAAATATTCCATTGACTGTTCGAAGGCCTACTTTGAGGGAAGCAAAGCGTGTATATAACCAGTTGACCCAAGTATCTTTTGAAGCGGATGAGAAGGAATGTCTACAATGTGATCAAGAGGAGTCAGAGTCAATTTCCTTAAGAAGTGCCGGCCCTGCCATCCACAAACAGGACATGTCTAACTTGGATGACAAGGATAGAAGTGAAACTTGTTCAAGTAAACAAGATAATGATAAACTCCTTATTTCAAGTGCCAGTGAGAGTGAGAATGAGATGATTGGTAAATCAACTCCTTTACATCAAGCAGCGCAATCTGGTGACTCTGACAAGGTTTTGGAACTCCTGGATCAGGGTATGGATCCTTGCATCAAAGATGAAAGGGGACGGACCCCATATATGTTGGCACATGAGAAGGAGGTGAGGAATACTTTCAGAAGGTTCATGGCATCAAACCCTGAAAAATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAATCAGCTAAGCAGGCGGAAAAAGATGCAAAGAGAAAAGCCAGAGCAAAAGAATTAAAAAAATTACGTAAAGCAAAACAAAAGAAGGCTCAGGCTGAAGCTGCCGAGAATTCTTCTAAAACTGCAGAAAACCAAGTGCAAGCTGCAAGTTCTATTTGTAAGGGACAATCTGAACCCAACAGTGGTTTGCAATTATCTAAAGAGGAGGAACTAAGAAGAGTGCAGGCTGAAGAAAGAGAAAAGAGAGCAGCTGCTGCAGAGAGAAGAATGGCTGCCCTCAAGATTCAAGGCAATAGTGCAACCGCTGTCCCTAGCACTTCAGGACCGAAAAGTGGGTTAGCTGGTGACATTTACTGTTCCTGTTGTAATACTTCACTGGCTGGTAAAGTTCCTTTCCACAGGTATAATTATAAATACTGCAGCACGTCATGCATGCATGTACACAGGGAGATCCTAGAGGATGGGTGA 2079 0.4315 MMSSQGPSAPGLLAKEVIRDSRLVSTTMAANVPAKSPTRSTPAISQDKRHCSIFELPPDFFHSCRLLPSAQSSVSEQIQNRDNSVLETLVPNEKDGSGSQQFVVSVPKWTCNTCKTQFESLQDQRSHFKSDIHRFNVKLTVAGKDIVKEEDFELLTSDSIKDYDVSSISGSDEDGDSETESQNQNDVHIKLSESFKKKLFISLETGQRVSIWKCLIMNMTENVLYENEKAQNEVLERLKSLTLEPRNNTHLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEIQELLTAWRIYFDVSSCTFLHAPSSSRQLLFDGERPYFSNQHRVIRNIPLTVRRPTLREAKRVYNQLTQVSFEADEKECLQCDQEESESISLRSAGPAIHKQDMSNLDDKDRSETCSSKQDNDKLLISSASESENEMIGKSTPLHQAAQSGDSDKVLELLDQGMDPCIKDERGRTPYMLAHEKEVRNTFRRFMASNPEKWDWHAAKVPSALTKEMEESQSAKQAEKDAKRKARAKELKKLRKAKQKKAQAEAAENSSKTAENQVQAASSICKGQSEPNSGLQLSKEEELRRVQAEEREKRAAAAERRMAALKIQGNSATAVPSTSGPKSGLAGDIYCSCCNTSLAGKVPFHRYNYKYCSTSCMHVHREILEDG 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1081 692 Pfam Bacteroidetes VLRF1 release factor 253 391 IPR041175 -
Bisa06g1081 692 ProSitePatterns Zinc finger C2H2 type domain signature. 111 133 IPR013087 -
Bisa06g1081 692 ProSiteProfiles Ankyrin repeat region circular profile. 458 490 - -
Bisa06g1081 692 MobiDBLite consensus disorder prediction 409 470 - -
Bisa06g1081 692 Coils Coil 604 633 - -
Bisa06g1081 692 Coils Coil 534 589 - -
Bisa06g1081 692 MobiDBLite consensus disorder prediction 166 186 - -
Bisa06g1081 692 Gene3D - 418 523 IPR036770 -
Bisa06g1081 692 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 45 691 IPR047139 -
Bisa06g1081 692 SUPERFAMILY beta-beta-alpha zinc fingers 98 141 IPR036236 -
Bisa06g1081 692 SUPERFAMILY Ankyrin repeat 459 511 IPR036770 -
Bisa06g1081 692 ProSiteProfiles Ankyrin repeat profile. 458 490 IPR002110 GO:0005515
Bisa06g1081 692 MobiDBLite consensus disorder prediction 439 468 - -
Bisa06g1081 692 MobiDBLite consensus disorder prediction 530 606 - -
Bisa06g1081 692 MobiDBLite consensus disorder prediction 422 438 - -
Bisa06g1081 692 MobiDBLite consensus disorder prediction 571 601 - -
Bisa06g1081 692 MobiDBLite consensus disorder prediction 537 551 - -
Bisa06g1081 692 Pfam Vms1-associating treble clef domain 655 687 IPR041540 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1081 52 639 C2H2 Transcription Factor Family AT1G01930 53.554 0.0 572