Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1063 ATGGAAAGCGATGCTTCTTCCTCTTCTTCCTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATCAAACTCCAAGCAGTTAGGCTCTGAAAGTGACTTCAAAGGCAAGCAATTATGCAAGAAGAGGCAGAGAAGTGAAGAAGATAATAACTGTGAAGACAAGAACCACCCTACGTACAGAGGCGTACGGATGAGAAATTGGGGAAAATGGGTATCAGAGATCCGCGAGCCCAGAAAGAAGTCGAGAATTTGGCTCGGTACGTATCCCACGGCGGAGATGGCAGCTCGAGCCCATGACGTAGCCGCTTTAGCGATCAAGGGTTGCTCGGCTTACCTCAATTTCCCTGAGCTGGCTCAGCTCCTGCCTCGTCCGGCCAGCTCGGCTCCCAAGGACATCCAAGCTGCGGCGGCCAAGGCCGCAGCCACAGTCTTCGACGAGGGTAAGAAGTGTGGAGCTGATGAAGCTGAGCCGAGCCGAGTGGATCCGCGGGCTTCTTCTTCTTCTTCGCCTTCAAGTTGTGCAAATGAGAATCCCTGTGCTGATGATGAAGACACGTTGTTTGACCTTCCAGATCTGTTCATTGATGGGAACGTTGGACTTTGGTCCGATTCGTCTTGGCATTTATTATGTACAGTTGATAGCGGTTTTAGGCTTGATGAGCCGTTTTTGTGGGAGAGCTACTAG 693 0.5036 MESDASSSSSSSSPSSSSSSSSSTSNSKQLGSESDFKGKQLCKKRQRSEEDNNCEDKNHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGCSAYLNFPELAQLLPRPASSAPKDIQAAAAKAAATVFDEGKKCGADEAEPSRVDPRASSSSSPSSCANENPCADDEDTLFDLPDLFIDGNVGLWSDSSWHLLCTVDSGFRLDEPFLWESY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1063 230 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Bisa06g1063 230 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Bisa06g1063 230 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Bisa06g1063 230 MobiDBLite consensus disorder prediction 1 34 - -
Bisa06g1063 230 MobiDBLite consensus disorder prediction 155 180 - -
Bisa06g1063 230 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Bisa06g1063 230 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Bisa06g1063 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 197 - -
Bisa06g1063 230 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Bisa06g1063 230 MobiDBLite consensus disorder prediction 164 180 - -
Bisa06g1063 230 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Bisa06g1063 230 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Bisa06g1063 230 MobiDBLite consensus disorder prediction 37 62 - -
Bisa06g1063 230 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Bisa06g1063 230 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1063 Bisa-ChrBisa06 37595790 37596482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1063 59 226 AP2-EREBP Transcription Factor Family AT2G44940 56.853 3.15e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g1063 AP2 5.2e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1063 06 37595790 37596482 Bisa06g1063 06 37595790 37596482 ECH