Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1057 ATGCCATACTGTGGTTGTCACATTTATATTTTCACTGACAAGGGAGAGGAAATATGTGATTTAATTTGGCAGGTCGTGCAGCTAAGGAAAACATGCAGCCATCCTTATCTTTTTCCAGGTATTGAGCCTGAACCTTATGAAGAGGGTGAACATCTGGTTCAGGCCAGTGGTAAACTGCTGATCCTGGACCAACTTCTTCAGAATTTGCATAATTCTAGACACCGTATCCTTCTTTTTGCTCAAATGACCCAAACACTTGACATTTTACAGGATTTTTTGGAGTTACGCAAATATTCCTATGAGCGTCTTGATGGATCAATTAGGGCTGAGGAACGCTTTGCTGCAATAAGAAGTTTCAGTGGCCCATCAACTAATTTGAGTTTGAATGCTGAAGCTGATCAAAATGGAGCCTTTGTCTTCATGATCTCAACAAGAGCTGGGGGAGTTGGCTTGAATCTTGTGGCTGCTGATACTGTTAAGCCTCATCAAGATTTAAGCCTTCGTTTGCAACGTCTTCACTTGTTTAATTCTTTGTATTGGTTTATGTTATTGAATGTATAG 561 0.4029 MPYCGCHIYIFTDKGEEICDLIWQVVQLRKTCSHPYLFPGIEPEPYEEGEHLVQASGKLLILDQLLQNLHNSRHRILLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRSFSGPSTNLSLNAEADQNGAFVFMISTRAGGVGLNLVAADTVKPHQDLSLRLQRLHLFNSLYWFMLLNV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1057 186 CDD SF2_C_SNF 50 159 - -
Bisa06g1057 186 Pfam Helicase conserved C-terminal domain 58 159 IPR001650 -
Bisa06g1057 186 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE 18 159 IPR031053 GO:0003678|GO:0006281|GO:0006338
Bisa06g1057 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 167 IPR027417 -
Bisa06g1057 186 Gene3D - 11 162 IPR027417 -
Bisa06g1057 186 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 61 186 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1057 Bisa-ChrBisa06 37283021 37284284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1057 56 156 RAD5 or RAD16-like Gene Family AT5G22750 33.663 1.17e-10 57.8