Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1053 ATGTTGGAATACGAATGGGGGAACCCGTCAGCGTTAGTGCTGACAGGGAATGAAGATGCTGCGGCGGCGACGGCGGCGGAGTCCGATCAAGCCCACCGGCAAATCTTCGACCACTACGCTTCCCATTCTTTATTATCGGAACATCTCCTTTCTCAAGAGCAGCAACCCGGTCCCACACCCACCACCGTCAGCGCCACCGCCGATTTTTCTCCCTACCACTTCAACCCCCAGCCCCACCACCATATCTACCACTCCTTCTTCGACCCACGCGCCTTCCCCGGCGCGTCCTCCTCCTACGCTCCACCGCCGCCCATGCTCTCTCTCGATCCGCTCCCATCCGTCAACGCCTCCCACTGCGGACCTGGGCTTCTGGTCGCTCCCAAGTCCGAGGATGTGGGCCGGCCCATGGACTTCCCGGCGTCCAGAATTGGTCTCAACCTGGGCGGCCGCACGTACTTCTCGTCGTCCGAGGATGACTTGGTGAGCCGGCTCTACCGCCGGTCCAGGCCGGCCGAGCCGGGCTCGTCAACAACGTCAAACTCGCCGCGGTGCCAGGCGGAGGGCTGCAATGCCGATCTCTCGCACGCTAAGCACTACCATCGCCGCCACAAGGTGTGCGAGTACCACTCCAAAGCCTCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAGTGTAGCAGGTTTCATCTTCTTTCCGAGTTCGATAATGGAAAACGAAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGGAAAACTCAGCAGCCAAATCAAGAAATCCTGAAATCCCAGGCCCAGCTCGAAAATACCCGAAATTCTACTTTTGATAGCGTTTCAAGGTCGCCACCAGAATCTGGGGCTCAGGGAATGTCGACGGTGACGGTGGCGGTTTCGCCGCCGGATTATTTCCGGCAAAGGGCATATCCGAATCAGAGTACTGGGTCATCGGCAACATCAAGCTCAATGTTCTTCTCAAGCGGATAG 999 0.5846 MLEYEWGNPSALVLTGNEDAAAATAAESDQAHRQIFDHYASHSLLSEHLLSQEQQPGPTPTTVSATADFSPYHFNPQPHHHIYHSFFDPRAFPGASSSYAPPPPMLSLDPLPSVNASHCGPGLLVAPKSEDVGRPMDFPASRIGLNLGGRTYFSSSEDDLVSRLYRRSRPAEPGSSTTSNSPRCQAEGCNADLSHAKHYHRRHKVCEYHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPNQEILKSQAQLENTRNSTFDSVSRSPPESGAQGMSTVTVAVSPPDYFRQRAYPNQSTGSSATSSSMFFSSG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1053 332 Pfam SBP domain 184 257 IPR004333 GO:0003677
Bisa06g1053 332 MobiDBLite consensus disorder prediction 310 332 - -
Bisa06g1053 332 MobiDBLite consensus disorder prediction 166 185 - -
Bisa06g1053 332 FunFam Squamosa promoter-binding-like protein 14 175 245 - -
Bisa06g1053 332 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 164 319 IPR044817 GO:0003677
Bisa06g1053 332 Gene3D - 174 245 IPR036893 GO:0003677|GO:0005634
Bisa06g1053 332 MobiDBLite consensus disorder prediction 250 332 - -
Bisa06g1053 332 MobiDBLite consensus disorder prediction 171 185 - -
Bisa06g1053 332 SUPERFAMILY SBT domain 182 261 IPR036893 GO:0003677|GO:0005634
Bisa06g1053 332 ProSiteProfiles Zinc finger SBP-type profile. 181 258 IPR004333 GO:0003677
Bisa06g1053 332 MobiDBLite consensus disorder prediction 262 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1053 Bisa-ChrBisa06 37146988 37148973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1053 1 231 SBP-box Gene Family AT1G02065 48.361 7.71e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa06g1053 SBP 7.5e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1053 06 37146988 37148973 Bisa06g1053 06 37146988 37148973 ECH