Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1047 ATGGACATGTACGTTTCAGACTGTTTTGGCATTGATGACCTTCTTGACTTCTCCAACGAAGAACTCACCACCTCCTCCTCCTCTTCCTCCACCGACTCCCACCACCACCAGCCGCCGCTGCCTTCGCCGCAAAACCCATTTCTCCACCACTACAGCCAATCCTCCTCCGACACCTTCAATAATTTCCCCTCCACCGACTTCACCGCCGATCTATGCGTCCCCAGCGATGACGTAGCGGAGCTAGAATGGCTCTCGCAATTCGTAGACAACTGCTTCCACAACTTCCCGGCGAAAGAGATGATGCTGGGTTCCTCCGCTCTCCGATCCGACACGTCGTTTAACAGCACAGCTTTCAGCAAGCGTTCGAGAGCATCCGCTCTAGAGGATCCCGTCGCGGGGAAATCAAGGCCCAAAACCCAGGCAAACGGCGGGTCGTTTTCATTGTCGGCAGAGGGATTAGATGTGCGCAGGTGCACCCACTGCGCGTCCGAGAAAACCCCGCAATGGCGAACCGGACCGCTCGGGCCCAAGACGCTGTGCAACGCGTGCGGTGTGAGGTACAAATCGGGTCGACTCGTACCAGAGTATCGACCAGCCTCCAGCCCGACGTTCGTGCTGACTCAGCACTCGAACTCGCACCGCAAGGTCCTGGAACTCCGAAGGCAGAAGGAGCTGGTGTTGATGAGATTGAAGCAGCAGGAACGGCAAAACAAGCAACACCAACAAGAGCAATGCTATCTTCACCAGCATGACTTCACTGACTGCTGA 768 0.5625 MDMYVSDCFGIDDLLDFSNEELTTSSSSSSTDSHHHQPPLPSPQNPFLHHYSQSSSDTFNNFPSTDFTADLCVPSDDVAELEWLSQFVDNCFHNFPAKEMMLGSSALRSDTSFNSTAFSKRSRASALEDPVAGKSRPKTQANGGSFSLSAEGLDVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVLELRRQKELVLMRLKQQERQNKQHQQEQCYLHQHDFTDC 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1047 255 PANTHER GATA TRANSCRIPTION FACTOR 135 225 - -
Bisa06g1047 255 ProSitePatterns GATA-type zinc finger domain. 158 183 IPR000679 GO:0006355|GO:0043565
Bisa06g1047 255 MobiDBLite consensus disorder prediction 22 38 - -
Bisa06g1047 255 MobiDBLite consensus disorder prediction 124 147 - -
Bisa06g1047 255 PIRSF Txn_fac_GATA_plant 2 248 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bisa06g1047 255 Pfam GATA zinc finger 158 191 IPR000679 GO:0006355|GO:0043565
Bisa06g1047 255 SMART GATA_3 152 202 IPR000679 GO:0006355|GO:0043565
Bisa06g1047 255 CDD ZnF_GATA 157 204 IPR000679 GO:0006355|GO:0043565
Bisa06g1047 255 Gene3D - 154 203 IPR013088 GO:0006355|GO:0008270
Bisa06g1047 255 ProSiteProfiles GATA-type zinc finger domain profile. 156 188 IPR000679 GO:0006355|GO:0043565
Bisa06g1047 255 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 156 216 - -
Bisa06g1047 255 MobiDBLite consensus disorder prediction 22 50 - -
Bisa06g1047 255 Coils Coil 216 243 - -
Bisa06g1047 255 FunFam GATA transcription factor 149 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1047 Bisa-ChrBisa06 36652371 36653559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1047 17 233 C2C2-Gata Transcription Factor Family AT2G45050 53.659 8.97e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa06g1047 GATA 1.7e-15 CL0167