Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1039 ATGAGCCAGTGCGTCCCCAGTTGGGATGTGGAAGACAGTCCCTCAGCCCGAAAAATTCGTTCTAACTCCAATTCCACAGCCCCTGATGTCCCCATGTTAGACTATGAAATTGCGGAGCTGACGTGGCAGAATGGGCAGCTATCCATGAACGGCTTGGGTCTGCCGCGTGTTCCGGCAAAAGCCACCACTGCCGGCGGCGGAGGCGGCGCTACAAACACCAGGTTGACTACCTCGGTCTCCAATTCCAAATACACATGGGAGAAGCTGCCACGTGGCAATGAAACCTTAGAGTCCATAGTCAACCAAGCGACTCGTTTCCCGCACCGCAGCAAATCCTTGTCCGACGGTGGTTCCGGTGCCGGTGAGGAGTTAGTGCCATGGTTTGATCCCCACCGAGCGGTGGCGCCGGCGCCGGCGTCAAACACAATGACTATGGACGCCTTAGTGCCTTGCTCGAACAGAACGGACGAGCAGAGCACGGGGGTTATGGACTCCGGAGGAATTGGCACGTGCGTGGGTGGTTGCTCGACACCTGTTGGATCTTGCAGAGGGACCGCCGTGCAGGACAGAGGGGCCGTCCTCCCCGCGAGACGCGCCGCTGTGGCGCGTGTGCCTGTGGCTCGCGAGTGGAGCAGCAGAGATCAAAGCATGAGTGGCAGAGATAGCCACCACGTCACCCTCGACACGTGCGACAGGGAATTGGATGTGGCTTACACTTCAACCTCAATGGGTTCGCCGGAAAACACAAGCTCCGCCAGGCAGTGCACCAAGACCACCGTCGCCGATGACCACGATTCTGTTTGCCACAGTACACAGAGAGAGGAAGGCGATGAAGAGGACAAGAAGAAAACAACACTAAAATCTTCAGTGTCCACTAAAAGGAGTAGAGCTGCTGCTGTACACAATCAGTCTGAAAGGAAAAGGAGAGATAAGATAAACCAAAGGATGAAGACACTGCAAAAGCTGGTCCCAAATTCCAGTAAGACTGATAAAGCATCCATGCTGGATGAGGTGATAGAATATCTGAAGCAGCTGCAAGCACAAGTGCAAATGATGAGCAGAATGAGCATGCCTTCCATGATGCTGCCAATGACCATGCAACCACAGCTTCAAATGTCCATGATGGCTCCAATGGGGATGGGCCTTGGAATGGGCCTGGGCATGGGCCTGGGAATGGACATGAACACCATGGCTCGCCCTAACATGAACATCCCCACGATTCCTCCTATCCTCCACCCTACCACTGCCTTCATGCCTATGGTCCCATGGGTCGACGTCTCTGGTGGCACCGGCGACCGGCTGCAAGCGGCTCCGGCCACGACCGCAATGCCTGACCCCTTGTCCACATTCCTAGCATGCCAGTCACAGCCCATGACCATGGATGCATACAATAGGATGGCTGCTATATATCAGCAGCTGCAGCAAGCTTCAGCATCTAATTCCAAGTGCTGA 1452 0.5523 MSQCVPSWDVEDSPSARKIRSNSNSTAPDVPMLDYEIAELTWQNGQLSMNGLGLPRVPAKATTAGGGGGATNTRLTTSVSNSKYTWEKLPRGNETLESIVNQATRFPHRSKSLSDGGSGAGEELVPWFDPHRAVAPAPASNTMTMDALVPCSNRTDEQSTGVMDSGGIGTCVGGCSTPVGSCRGTAVQDRGAVLPARRAAVARVPVAREWSSRDQSMSGRDSHHVTLDTCDRELDVAYTSTSMGSPENTSSARQCTKTTVADDHDSVCHSTQREEGDEEDKKKTTLKSSVSTKRSRAAAVHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSRMSMPSMMLPMTMQPQLQMSMMAPMGMGLGMGLGMGLGMDMNTMARPNMNIPTIPPILHPTTAFMPMVPWVDVSGGTGDRLQAAPATTAMPDPLSTFLACQSQPMTMDAYNRMAAIYQQLQQASASNSKC 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1039 483 Coils Coil 302 322 - -
Bisa06g1039 483 Gene3D - 291 356 IPR036638 GO:0046983
Bisa06g1039 483 MobiDBLite consensus disorder prediction 258 287 - -
Bisa06g1039 483 MobiDBLite consensus disorder prediction 1 29 - -
Bisa06g1039 483 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 294 355 IPR036638 GO:0046983
Bisa06g1039 483 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 38 481 IPR031066 -
Bisa06g1039 483 Pfam Helix-loop-helix DNA-binding domain 300 346 IPR011598 GO:0046983
Bisa06g1039 483 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 296 345 IPR011598 GO:0046983
Bisa06g1039 483 MobiDBLite consensus disorder prediction 240 311 - -
Bisa06g1039 483 SMART finulus 302 351 IPR011598 GO:0046983
Bisa06g1039 483 FunFam transcription factor UNE10 isoform X1 291 356 - -
Bisa06g1039 483 CDD bHLH_AtPIF_like 296 350 IPR047265 -
Bisa06g1039 483 MobiDBLite consensus disorder prediction 240 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1039 Bisa-ChrBisa06 36052828 36059370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1039 1 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 48.401 7.65e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa06g1039 HLH 2.5e-14 No_clan