LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa06g1037	ATGGCTCTATTCAATCTTCAACTTTCATTCTCTCATTTCCTCATTCTTGTTGCTTTCATTTCACTCTTCCTTGTCAGCCCTTCCTCTTCCTCCAACCCTAGAAGGCTTCTTAATTCTTCATACGCTGCTTCGGATTGGTCCCCGGCAGACGCCACTTGGTATGGGAGTCCCACCGGCGCCGGAAGTGATGGAGGCGCTTGTGGATATGGGAATGCTGTAGGGCAACCTCCATTTTCTTCAATGGTGTCAGCTGGAGGGCCACCTCTGTATAACTCAGGCGAAGGCTGTGGAACTTGTTATGAGGTGAAGTGCACAGGGAATGCTGCTTGTTCCGGAAATGCAGTGAAAGTGGTTATCACTGACGAGTGCCCTGGCTGTGGCTCTGCTCAGAGATTTCACTTTGATTTGAGTGGCACTGCTTTTGCTGCCCTCGCAACTTCTGGTCAGACCCAGCAGCTCCAAAACGCTGGCAAAATTGAGATTCAATATAGAAGAGCTGATTGCAACTATCCAGGAACTTCATTAGCATTTAAAGTGGATCCTGGATCCAACCAACAATTTTTTGCCGTGGTGATTGAGTATGAGGATGGAGATGGTGACCTAGCCAGTGTTGAGCTCAAGGAAGGTCCGGCCTCGGCGCCATGGCTTCCCATGCAACACTCGTGGGGTGCAACTTGGAAGCTTAACGCCGTCTCGGCACTTCAGCCTCCTTTCTCTATCCGACTAACCTCCGTCGAGTCCCACGAAGCCGTCGTCGCAAACAACGTGATTCCGGCGGGGTGGAAGCCTGGTGAAACTTATCGATCAGTGGTCAACTTCAATTAA	825	0.5042	MALFNLQLSFSHFLILVAFISLFLVSPSSSSNPRRLLNSSYAASDWSPADATWYGSPTGAGSDGGACGYGNAVGQPPFSSMVSAGGPPLYNSGEGCGTCYEVKCTGNAACSGNAVKVVITDECPGCGSAQRFHFDLSGTAFAALATSGQTQQLQNAGKIEIQYRRADCNYPGTSLAFKVDPGSNQQFFAVVIEYEDGDGDLASVELKEGPASAPWLPMQHSWGATWKLNAVSALQPPFSIRLTSVESHEAVVANNVIPAGWKPGETYRSVVNFN	274

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa06g1037	274	Gene3D	-	170	274	IPR036749	-
	Bisa06g1037	274	Pfam	Expansin C-terminal domain	176	258	IPR007117	-
	Bisa06g1037	274	ProSiteProfiles	Expansin, Cellulose-binding-like domain profile.	186	269	IPR007117	-
	Bisa06g1037	274	SUPERFAMILY	PHL pollen allergen	174	269	IPR036749	-
	Bisa06g1037	274	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	64	173	IPR007112	-
	Bisa06g1037	274	CDD	DPBB_EXPB_N	46	168	-	-
	Bisa06g1037	274	PRINTS	Major pollen allergen Lol pI signature	84	95	IPR005795	GO:0005576\|GO:0019953
	Bisa06g1037	274	PRINTS	Major pollen allergen Lol pI signature	193	208	IPR005795	GO:0005576\|GO:0019953
	Bisa06g1037	274	PRINTS	Major pollen allergen Lol pI signature	145	160	IPR005795	GO:0005576\|GO:0019953
	Bisa06g1037	274	PRINTS	Major pollen allergen Lol pI signature	224	241	IPR005795	GO:0005576\|GO:0019953

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa06g1037	Bisa-ChrBisa06	35927754	35931515	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa06g1037	44	273	Expansin Gene Family	AT1G65680	60.870	1.31e-104	303

Showing 1 to 1 of 1 entries