Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1036 ATGGAGAAGCACAAGTGCAAGCTCTGCTTCAGGAATTTCTCAAATGGTAGAGCGTTGGGAGGTCACATGAGGTCTCACATGGTGAACCTCCCTGTTCCTCCGAAACAGCAGGAGGAGCCGCCGTTAATGCAACTCAGCTTCGAGGCCGAGTCGGCTTCTTCTTCGTCGTCATCGGAAGAGGAAGATGAAGGAGAAGATAAGAGCCTCTGCTATGGCCTCAGAGAGAATCCGAAGAGAAGCATTCGGCTTGGAGATCCTGAGTTCTCGTTCGCCGTGGAAACGGGCTCTGTAATTCTTCAAGACAGAGAGAGCGAGACCGAGTCGTCCAAAAACCCGACTCGGAGAAGATCTAAAAGGGCATGGAATCAATACGACCATCGCGATCACAATCATCATCATAACCATCACCACCACCACCATCATAAAGCTCACAAGCAAATTCCAGAGCAAGATGCGTTCAAGAAACTGAAATCAACGAACAAACCAAGTCACACTAATCATAATAACAACAAGACTGAGTCGTCCTGGTTTGAGCCTGAACCGGTGAGTTCGATTTCCGATGCGACCACCGAAGAGGACGTCGCATTTTGCCTTATGATGCTGTCGAGGGACAAATGGAGAAGACAAAAGGATCAAGAGAAAGACCAAGACGAACACGAAGACGAGGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAGGAGGACGAGGACGAGGAGGAAGCCGAGAGATCCTTGGAAGACTCGGACGAATTTTCCGAGGAGCTCAAATCGTCGAAGACCCGACTAGTTCGCGGGAGGTACAAATGCGAGACGTGCAAGAAGGTGTTTCGATCTTATCAAGCCCTGGGGGGGCACAGAGCGAGCCACAAGAAGATCAAAGTGACCATATGCGAGCCCGAATTGGAGGAAGAAAATGCGGCTCCCATGGCGGCGAAGAAAATCCATGAATGCCCAGTTTGCTTCAGAGTGTTCGCCTCGGGTCAAGCACTCGGTGGCCACAAGAGAACCCACGTGAGTCACGTGACCGGTTCCTCTGCAACTCCACTTCGAGCCACTTCCACAAAGTCCTTCGGAGACAACAACTTGATAGATCTCAACCTTCCCGCTCCAGTCGATGACGACGATATGAGCCAAATCGAAAATTCTGCGGTTTCAGATGCAGAATTCCTCAAACCCAACAGGCAAATTATCGGCCCACAAGTAGCTTGA 1212 0.5025 MEKHKCKLCFRNFSNGRALGGHMRSHMVNLPVPPKQQEEPPLMQLSFEAESASSSSSSEEEDEGEDKSLCYGLRENPKRSIRLGDPEFSFAVETGSVILQDRESETESSKNPTRRRSKRAWNQYDHRDHNHHHNHHHHHHHKAHKQIPEQDAFKKLKSTNKPSHTNHNNNKTESSWFEPEPVSSISDATTEEDVAFCLMMLSRDKWRRQKDQEKDQDEHEDEEEEEEEEEEEEEEDEDEEEAERSLEDSDEFSEELKSSKTRLVRGRYKCETCKKVFRSYQALGGHRASHKKIKVTICEPELEEENAAPMAAKKIHECPVCFRVFASGQALGGHKRTHVSHVTGSSATPLRATSTKSFGDNNLIDLNLPAPVDDDDMSQIENSAVSDAEFLKPNRQIIGPQVA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1036 403 MobiDBLite consensus disorder prediction 103 128 - -
Bisa06g1036 403 ProSiteProfiles Zinc finger C2H2 type domain profile. 316 343 IPR013087 -
Bisa06g1036 403 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Bisa06g1036 403 ProSiteProfiles Zinc finger C2H2 type domain profile. 268 295 IPR013087 -
Bisa06g1036 403 MobiDBLite consensus disorder prediction 162 184 - -
Bisa06g1036 403 MobiDBLite consensus disorder prediction 29 72 - -
Bisa06g1036 403 ProSitePatterns Zinc finger C2H2 type domain signature. 318 338 IPR013087 -
Bisa06g1036 403 MobiDBLite consensus disorder prediction 216 249 - -
Bisa06g1036 403 Gene3D Classic Zinc Finger 265 338 - -
Bisa06g1036 403 MobiDBLite consensus disorder prediction 99 184 - -
Bisa06g1036 403 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 395 IPR044303 GO:0006355
Bisa06g1036 403 Coils Coil 207 248 - -
Bisa06g1036 403 Pfam C2H2-type zinc finger 316 338 - -
Bisa06g1036 403 Pfam C2H2-type zinc finger 4 27 - -
Bisa06g1036 403 Pfam C2H2-type zinc finger 267 292 - -
Bisa06g1036 403 ProSitePatterns Zinc finger C2H2 type domain signature. 270 290 IPR013087 -
Bisa06g1036 403 SMART c2h2final6 316 338 IPR013087 -
Bisa06g1036 403 SMART c2h2final6 268 290 IPR013087 -
Bisa06g1036 403 SMART c2h2final6 4 26 IPR013087 -
Bisa06g1036 403 MobiDBLite consensus disorder prediction 129 144 - -
Bisa06g1036 403 MobiDBLite consensus disorder prediction 207 258 - -
Bisa06g1036 403 SUPERFAMILY beta-beta-alpha zinc fingers 267 338 IPR036236 -
Bisa06g1036 403 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1036 Bisa-ChrBisa06 35869293 35870504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1036 1 380 C2H2 Transcription Factor Family AT3G60580 40.933 3.69e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa06g1036 zf-C2H2_6 9.9e-12 CL0361