Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1035 ATGGCTTTGGCTGTGGATCAGCACCAATCCAACTTGAAGCACTTCTGTAAAATCTGCAAGAAAGGTTTCGGGTGCGGTAGAGCTCTAGGAGGGCACATGAGGGCCCATGGCATCGGCGACGACAGCTGGCACGTTGAGGACGACGACCCTGCCAGCGATTGGGAAGACAAGCTCGCCGCCGGCGGAGCCACCACCAAGTGCATGTACTCTCTACGAACAAATCCTAACCGCCTCAAGAGCTGCCGCGTCTGCGAGAATTGCGGTAAAGAGTTCTTGTCCTGGAAGTCCTTCCTGGAGCACGGCAAGTGCACCTCCGACGCCGACGCCAACTCCCCGGTATCGTCTCGGGGCTCCGATGGTGACATCGTCGTCGGAGACGACCTCCGAGGCTGCGGTTGGTCCAAAAGGAAGCGGTCGTTCAGATCAGCTAAACTTGGTATTGGAATTGGAAACTTTAACTCCGTAAATTGCCCTTCAAGTGAAGAGGAAGATCTCGCCAACTGTCTAATGATGTTGTCCAACGCCGCGGCGGTGGAGCCGCTCATGGCGGAGCCGGAAGAGTCTTGTGCCTCGGCGAGCAGAGACGAAGAAATTAGAAGAAACCCTATCAATAACTTCATAGCTCCGATGTCTTACAAAACCAATCGCACCGTGGATCACAAGGCCAAAGCCGTTGCTCCGAAAGGCTTGTTCGAATGCAAGGCGTGCAAGAAGGTGTTCAACTCGCATCAAGCCCTGGGAGGCCACAGGGCTAGCCACAAGAAAGTCAAGGGCTGCTTCGCTTCGAGACTCGACCACCTCGATGACATCAGCTTCGGCGCCGACGATGACTTCATCACCCACGAGGAGTTCCTCCCCTCGAAATCAAACTACGACGACGGCTACAACAATTCCAAGGCCTCGTTACTGGTGGCGTCGTCTTCGTCGAAGAAGAAACCGAAGGTTCACGAATGCTCCATATGTCACCGGACGTTCTCATCCGGGCAGGCACTCGGAGGCCACAAGCGGTGCCATTGGATCACGTCGAACGAGCCGGACACATCAGCACTGTCGAGGTTTCAGCGGTTTCAGGAGCAGCCGCACGATCGGATCATTCCCAAGTTTGATAATAACAACTCGTCGGAGCCGCTCGATCTGAAGCTCGACCTCAACCTTCCGGCCCCGGCCAACGACCTCGCGGCCAGCCGGGATATTTCCACGGAGATTTACTTGCAGCCGTGGATAGGAACAAAGGAGAATGATGATAATAATAATAATATCAATGACAATAATAACAGTAAGAATAAGAATAGTAATAATTATACTAACAGTCATCACCGTCAGTATCGCAGTGGAAACGACAACGTGGAGGAGAACAAAAATAATAACAACAGTAATTTGTCGTTGCAAAACGTGGTGGAGGATGAAGCTGATAGTAAGGTGAAGTTAGCGAAACTGAGTGAGCTAAAGGACATGAACGTAGGAGGGAGTTCTTCGCCTTGGCTTCAGGTCGGAATTGGTTCCACTGGTGTGGGAGAACCGTAA 1524 0.5249 MALAVDQHQSNLKHFCKICKKGFGCGRALGGHMRAHGIGDDSWHVEDDDPASDWEDKLAAGGATTKCMYSLRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSDADANSPVSSRGSDGDIVVGDDLRGCGWSKRKRSFRSAKLGIGIGNFNSVNCPSSEEEDLANCLMMLSNAAAVEPLMAEPEESCASASRDEEIRRNPINNFIAPMSYKTNRTVDHKAKAVAPKGLFECKACKKVFNSHQALGGHRASHKKVKGCFASRLDHLDDISFGADDDFITHEEFLPSKSNYDDGYNNSKASLLVASSSSKKKPKVHECSICHRTFSSGQALGGHKRCHWITSNEPDTSALSRFQRFQEQPHDRIIPKFDNNNSSEPLDLKLDLNLPAPANDLAASRDISTEIYLQPWIGTKENDDNNNNINDNNNSKNKNSNNYTNSHHRQYRSGNDNVEENKNNNNSNLSLQNVVEDEADSKVKLAKLSELKDMNVGGSSSPWLQVGIGSTGVGEP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1035 507 Gene3D Classic Zinc Finger 228 338 - -
Bisa06g1035 507 MobiDBLite consensus disorder prediction 485 507 - -
Bisa06g1035 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 231 258 IPR013087 -
Bisa06g1035 507 SMART c2h2final6 231 253 IPR013087 -
Bisa06g1035 507 SMART c2h2final6 316 338 IPR013087 -
Bisa06g1035 507 SMART c2h2final6 14 36 IPR013087 -
Bisa06g1035 507 MobiDBLite consensus disorder prediction 409 466 - -
Bisa06g1035 507 Pfam C2H2-type zinc finger 14 36 - -
Bisa06g1035 507 Pfam C2H2-type zinc finger 315 340 - -
Bisa06g1035 507 Pfam C2H2-type zinc finger 231 255 - -
Bisa06g1035 507 ProSitePatterns Zinc finger C2H2 type domain signature. 16 36 IPR013087 -
Bisa06g1035 507 ProSitePatterns Zinc finger C2H2 type domain signature. 318 338 IPR013087 -
Bisa06g1035 507 ProSitePatterns Zinc finger C2H2 type domain signature. 233 253 IPR013087 -
Bisa06g1035 507 PANTHER OS02G0659100 PROTEIN 5 502 - -
Bisa06g1035 507 MobiDBLite consensus disorder prediction 410 466 - -
Bisa06g1035 507 SUPERFAMILY beta-beta-alpha zinc fingers 230 338 IPR036236 -
Bisa06g1035 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 316 338 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1035 Bisa-ChrBisa06 35836004 35837527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1035 135 426 C2H2 Transcription Factor Family AT1G02040 33.447 5.11e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa06g1035 zf-C2H2_6 2.2e-12 CL0361