Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1032 ATGGATTATTCCGCCTACCAACAACAGCAGCAACAACCGTATGACCCTTCTCAAAATCAAGCCTACGATCAATCATCCCAATCGTATTACGGCTACAATCAACAATACGACCAGCAGTATGCGTACTATCCCAACCAAGATCAAGGAAATTCATATGCCCAGCAAGCCAATCAACAATTCCAACTAGAACCTACCTCGATTAACCCTCCTGGGGTCCCAATCCTTCCCGAACATAACCAGATGCAAAATCAGCAGAACGTTCATTATCTCACTGGGGTTTCGGAAAATCAGCAGCAACCCAATCCGGATTTAGGTGCGGCGGTCGCTGGCGCGGTGAATCCTGAAGCCGCTCTCTCGCAGTTTACTCACTTTGCAGGGAACTCTGCGCCACATCCGCCGATCGGGCAGTTTAGATACAGAGGTGGAGGTGGCAGGGGAAATAGACCATTTAGACGGGGTGGTCGGGGCAATATCAATCCCCGTGGTCGAGGCCCTTACCGTGGTAGGGGACGTGGTAGGCACTTCCCATTTCATTCTTCCGGACCAGGCAATTCTTATGTAGAAATTGTACCAGCAGCTGCTGGAGCCCCTTCAGTGCCACAAGTTTCATCATCGGTATCTGGGAATGTATCTTTACCTGCACCTGCACAAGTTCCAACTGCACCTGCACAGGTTCCAACTGCACCTGCACACGTTCCAACTGTACCTGCACAGGTTCCAACTGCACCATTGCAACCACGTAAGGCATGGTGTGAAATTTGTAAGGTTGAGTGCAATACTCCAGAAATTTTGGAGCAGCACAAGAATGGAAAGCGACATAAAAAGAATGTGCTAGTGCATGAGGAATTACAGAGGCACAAATCTATTAATGGACAGCAGAGTGGCCAGATGCCTACTTCTCAACTAAATTCAACAGTTCAGGCAGAGAAACTTCCAGAATCAAACTCTGAAGGATGCCTGGTGAAAAATGTGGGATCTGAAGCTACAGATGACAATCCCAAGGATGAAACTGAGGTGCAGAATAATATAGGAGAGACTTCTGAAGTTTCAGCTGATAAACCTGAGGGAAACCCCAGGGATGGTTTTGCACCACGGGGTCGTGGTCTCAAGCGTAAGATGAGAGGAGGCAGAGGTGGTAAATACATGAGGCCTAATGATGGGTCAAGAACGCCAGTGGAACCTCCAAAACCTAAGCAGCTAATATCTTTCATATGTGAGTTGTGCAATGTTAAATGTGAGTCACAGGTTGTTTATGACAGCCACTTGACAGGAAAAAAGCACCAATCGAGTCTCAAGCGCGTCCATGGCCACCAAGCTTTGTCTGGAGAACAAGGGCTGCAAGCAATTTACCCAACTGACATCAGTGCTCTGTCTAATTCAATTGACATCAATGCTCTGTCGAATTCAATTAACTCTCAAGTCCAACAAGGTGTTAATGATCCGCAGGTCCTTTTGGCTCAGCTCTTAATGACAGTACTATCTCAAACCCAAGCATCAGCAGTAGCACCACCATCAGGGTCTGTGGCTGCTCAGGTTTCTGCACCCGCGCTGGTGGCAGGATCAAGTCATGAATCCCAGTTTCAAAGTGTCTCACAGACACAAGTGTCAGAAACCACGGCAAATGATGGGAAAGAAAATCCTTCTGGAGAAACAAAAGTCGCGCTCGAAGCCCCCAAAACTGCAGAGGGAAGTTCTGAAACTGAAGAGGTGCAAAAGCTTCCCCAGAATAGCTCAGTTCCGACGCCAGCAGAAAATCCAATTGCAGCAGATGAGCATCCTTCAGAATGCAAAGCTCCGAATTCATAG 1806 0.4773 MDYSAYQQQQQQPYDPSQNQAYDQSSQSYYGYNQQYDQQYAYYPNQDQGNSYAQQANQQFQLEPTSINPPGVPILPEHNQMQNQQNVHYLTGVSENQQQPNPDLGAAVAGAVNPEAALSQFTHFAGNSAPHPPIGQFRYRGGGGRGNRPFRRGGRGNINPRGRGPYRGRGRGRHFPFHSSGPGNSYVEIVPAAAGAPSVPQVSSSVSGNVSLPAPAQVPTAPAQVPTAPAHVPTVPAQVPTAPLQPRKAWCEICKVECNTPEILEQHKNGKRHKKNVLVHEELQRHKSINGQQSGQMPTSQLNSTVQAEKLPESNSEGCLVKNVGSEATDDNPKDETEVQNNIGETSEVSADKPEGNPRDGFAPRGRGLKRKMRGGRGGKYMRPNDGSRTPVEPPKPKQLISFICELCNVKCESQVVYDSHLTGKKHQSSLKRVHGHQALSGEQGLQAIYPTDISALSNSIDINALSNSINSQVQQGVNDPQVLLAQLLMTVLSQTQASAVAPPSGSVAAQVSAPALVAGSSHESQFQSVSQTQVSETTANDGKENPSGETKVALEAPKTAEGSSETEEVQKLPQNSSVPTPAENPIAADEHPSECKAPNS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1032 601 SUPERFAMILY beta-beta-alpha zinc fingers 394 434 IPR036236 -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 523 546 - -
Bisa06g1032 601 SMART ZnF_U1_5 246 280 IPR003604 GO:0003676|GO:0008270
Bisa06g1032 601 SMART ZnF_U1_5 400 434 IPR003604 GO:0003676|GO:0008270
Bisa06g1032 601 MobiDBLite consensus disorder prediction 523 601 - -
Bisa06g1032 601 Gene3D Classic Zinc Finger 388 433 - -
Bisa06g1032 601 Gene3D Classic Zinc Finger 236 280 - -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 567 583 - -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 288 395 - -
Bisa06g1032 601 Pfam Zinc-finger of C2H2 type 250 273 - -
Bisa06g1032 601 Pfam Zinc-finger of C2H2 type 403 427 - -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 125 169 - -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 288 312 - -
Bisa06g1032 601 SUPERFAMILY beta-beta-alpha zinc fingers 221 278 IPR036236 -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 1 30 - -
Bisa06g1032 601 PANTHER OS06G0651300 PROTEIN-RELATED 5 535 - -
Bisa06g1032 601 MobiDBLite consensus disorder prediction 352 367 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1032 403 431 C2H2 Transcription Factor Family AT5G61190 58.621 3.53e-06 48.5