Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0990 ATGTCCGCCTCATCAACTACTTCCTTTTCACCGGACCAGCACCTCCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGCTTGTTCAAGACTGTCACTGTGCGATGTGGTCATTGCACCAACCTTCTCTCTGTGACTGTGAACATGCGTGGCCTGCTTCTTCCTTCACACAATCAGCTCCACCTTGGCCACTCCTTCTTCACTCCTCAAACTCTTCTGGAGGAGATTCGAAGTGCACCCACATCAAACCTGATGAATCACCTGCAGAATAACCCAAATGATTTGGTTATGAGTACCCCACGAGGAGGACCTGAGGAAATCCCCAAGCCTCCACCGGCAAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGGTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCTGATATTAGCCACAGAGAGGCTTTCAGCGCTGCTGCAAAGAATTGGGCCCACTTCCCACACATCCACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTACGCCAGGAAGGAGAGGACGTGCTTATGAAAGACGGGTTTTTCGCGCCTGCAAATCTAGGCGTCTCTCCCTATTAG 660 0.5106 MSASSTTSFSPDQHLLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVTVNMRGLLLPSHNQLHLGHSFFTPQTLLEEIRSAPTSNLMNHLQNNPNDLVMSTPRGGPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDVLMKDGFFAPANLGVSPY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0990 219 CDD HMG-box_SF 137 173 - -
Bisa06g0990 219 PANTHER PROTEIN YABBY 6-RELATED 5 195 IPR006780 GO:0007275
Bisa06g0990 219 FunFam Axial regulator YABBY 128 200 - -
Bisa06g0990 219 SUPERFAMILY HMG-box 128 177 IPR036910 -
Bisa06g0990 219 MobiDBLite consensus disorder prediction 102 138 - -
Bisa06g0990 219 Pfam YABBY protein 18 183 IPR006780 GO:0007275
Bisa06g0990 219 Gene3D High mobility group box domain 123 179 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0990 Bisa-ChrBisa06 33786948 33789987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0990 29 217 C2C2-YABBY Transcription Factor Family AT4G00180 65.072 2.10e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa06g0990 YABBY 1.5e-71 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g0990 06 33786948 33789987 Bisa06g0990 06 33786948 33789987 ECH