Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0984 ATGGCTACGTTTGGTTCAGTAATGATTCTTTTGGTTCTTCCCTTTCTACTTTGCTCCTTTAGTGTTTATGGCTACTCATTGAATGAAGTGAAAGAATGGTGTAGCGAAACCCCTAACCCTCAACCATGTGAGTACTTCTTGAGCACCAAAGCTTTCAACAAACCCATCAAGCAAAAATCCGATTTTTTCAAAATTTCCCTCCAACTTGCTCTAGAGAGAGCAAAAAAGGGCCAAGAGAAGACTTCATCTTTAGGCCCCAAGTGTAGAAACCCTCAAGAAAAAGCTGCATGGGCCGATTGCCTTGAACTCTATGACCAAACCATCCAAAAGCTAAACAAAACCATAGACCCTAAAATCAATTGCACCCAAACGGAAGCTCAAACATGGCTTAGCACGGCTCTCACAAACCTCGAGACTTGCGTCTTAGGGTTTTACGAGCTCGGGGTTTCAGACTACATCTTGCCCTTGATGTCCAACAACGTTACTAAGCTGTTAAGCAACACCTTGTCTCTGAACAAGGTTCCATACAAAGTACCGAGTTCTAAAAAAGGGTTCCCAAAGTGGGTCAAGCCCCATGACCGGAAGCTATTGCAGGCAGCTACACCAGCATCTCAGGCTAATGTGGTGGTGGCGAAAGACGGTTCTGGCAAATATGAAACCTTGAAGGAAGCTGTAGATGACGCACCAAGTAGTGGCAGTGAGAGGTATGTGATATATGTGAAGGAAGGAGTGTACAATGAACAAGTTGAGATCAAAGGAGATAATATCATGTTGGTAGGAGATGGTATTGGGAAAACTATAATCACTGGCAGTAAAAGTGTGGGAGGAGGCTCCACCACCTTCCGTTCAGCCACCGTTGCTGCTACTGGGGACGGATTTATTGCTCGAGACATCACATTTAGGAACACAGCGGGAGCAAAAAGCCACCAAGCGGTGGCGTTTCGATCAGGGTCCGACCTATCAGTGTTCTACAAATGTAGTTTTGAAGGCTACCAGGACACACTGTACGTCCACTCCCAGAGACAATTCTACAAGGAATGCGACGTATACGGCACAGTGGACTTCATCTTTGGCAACTCGGCAGTCGTTTTGCAAAACTGCAACCTCTACGCGCGAACCCCTCCCCAACGAACCATCACGTTCACTGCCCAAGGCCGAACCGACCCGAACCAAAACACGGGAATCGTGATCCACGACTCCCGCGTGACGGGCGCGTCTAATTTCGACGGGACCAACGTCAAATCGTTCTTGGGAAGGCCATGGAAAGAGTACTCGAGGACGGTATACATGAAGAGTTATCTGGGCGATCTGATTAACCCTGAGGGATGGATGGAATGGAGTGGGAATTTCGCGTTGGACACGTTGTACTATGCGGAGTACGGGAACACGGGGCCCGGCTCTTCCACGGCAAATAGGGTGACGTGGAAGGGGTACCACGTCATCGATGCCTCAGAGGCTTCGCAGTTCACTGTTGGAACCTTTCTTGATGGGACCCAATGGATATCTGCTGCTGACGTGACTTTCACAGCTAGACTTTGA 1539 0.4821 MATFGSVMILLVLPFLLCSFSVYGYSLNEVKEWCSETPNPQPCEYFLSTKAFNKPIKQKSDFFKISLQLALERAKKGQEKTSSLGPKCRNPQEKAAWADCLELYDQTIQKLNKTIDPKINCTQTEAQTWLSTALTNLETCVLGFYELGVSDYILPLMSNNVTKLLSNTLSLNKVPYKVPSSKKGFPKWVKPHDRKLLQAATPASQANVVVAKDGSGKYETLKEAVDDAPSSGSERYVIYVKEGVYNEQVEIKGDNIMLVGDGIGKTIITGSKSVGGGSTTFRSATVAATGDGFIARDITFRNTAGAKSHQAVAFRSGSDLSVFYKCSFEGYQDTLYVHSQRQFYKECDVYGTVDFIFGNSAVVLQNCNLYARTPPQRTITFTAQGRTDPNQNTGIVIHDSRVTGASNFDGTNVKSFLGRPWKEYSRTVYMKSYLGDLINPEGWMEWSGNFALDTLYYAEYGNTGPGSSTANRVTWKGYHVIDASEASQFTVGTFLDGTQWISAADVTFTARL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0984 512 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 174 IPR035513 -
Bisa06g0984 512 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 175 IPR035513 -
Bisa06g0984 512 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Bisa06g0984 512 Pfam Pectinesterase 207 497 IPR000070 GO:0030599|GO:0042545
Bisa06g0984 512 FunFam Pectinesterase 25 174 - -
Bisa06g0984 512 Pfam Plant invertase/pectin methylesterase inhibitor 29 171 IPR006501 GO:0004857
Bisa06g0984 512 SUPERFAMILY Pectin lyase-like 201 509 IPR011050 -
Bisa06g0984 512 CDD PMEI-like_3 33 173 - -
Bisa06g0984 512 Gene3D - 202 512 IPR012334 -
Bisa06g0984 512 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Bisa06g0984 512 NCBIfam pectinesterase inhibitor domain 9 174 IPR006501 GO:0004857
Bisa06g0984 512 FunFam Pectinesterase 201 512 - -
Bisa06g0984 512 PANTHER PECTINESTERASE 15 502 - -
Bisa06g0984 512 SMART PMEI_2 25 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0984 Bisa-ChrBisa06 33529552 33532785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0984 1 512 Carbohydrate Esterase AT2G45220 63.953 0.0 692