Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa06g0978 | ATGGCACAACTCAACCTCACATTGCCGGTCATCTTCCTCCTTCTCTTCTCATATTTATATTTGGCCACAGCTCGCAGAATATATAATCCCCAAACCATGGCCCTCATAAGGTCCTCTTGCCACGCCACTCTCTATCCAAACCTATGCAAGCGTTGCTTATCAAAGTTTGCCAATTCGACAATACAAAACCCACAACAGTTAGCACATGTGGCCTTATCTGTGAGTCTCTCAAGAGCCGTATACACAAGAGGGTACTTGCAGAGAGTGGCAGAGGAATTTAGGGCGGCGAAGAATAATAATATAGACTACCTAATTGTGCAAGATTGCTTGGAGCAAATCAATGATAGCGTGGACCAGCTCAGCCTTTCCATTAAAGAGCTTAGACGGTTGGACCGGAGAGTCAGCACCGGCACTGATACGATTATCAACGATGCTATTTTGTGGCACATAAGTAACGTTGAGACCTGGGTAAGCACTGCCCTCACTGATGCTAGCACTTGTGGGAACTCGTTCCCAGGTCAGAGGATGAATAAACTCAAGGCTACCATTAAGGTCAAGGCCTTAAATGTTGCACAAGTCACTAGTAATGCACTTGCCATATTTCATGGATATGCAGCTAAGTATCGAGCAGCAGCAGCTAGAGCCACCAAGAAACCCTAA | 660 | 0.4576 | MAQLNLTLPVIFLLLFSYLYLATARRIYNPQTMALIRSSCHATLYPNLCKRCLSKFANSTIQNPQQLAHVALSVSLSRAVYTRGYLQRVAEEFRAAKNNNIDYLIVQDCLEQINDSVDQLSLSIKELRRLDRRVSTGTDTIINDAILWHISNVETWVSTALTDASTCGNSFPGQRMNKLKATIKVKALNVAQVTSNALAIFHGYAAKYRAAAARATKKP | 219 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa06g0978 | 219 | Pfam | Plant invertase/pectin methylesterase inhibitor | 35 | 200 | IPR006501 | GO:0004857 | |
| Bisa06g0978 | 219 | SMART | PMEI_2 | 31 | 200 | IPR006501 | GO:0004857 | |
| Bisa06g0978 | 219 | CDD | PMEI-like_3 | 38 | 202 | - | - | |
| Bisa06g0978 | 219 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 11 | 200 | - | - | |
| Bisa06g0978 | 219 | Coils | Coil | 110 | 130 | - | - | |
| Bisa06g0978 | 219 | FunFam | Pectinesterase inhibitor 3 | 31 | 205 | - | - | |
| Bisa06g0978 | 219 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 31 | 203 | IPR035513 | - | |
| Bisa06g0978 | 219 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 35 | 202 | IPR035513 | - | |
| Bisa06g0978 | 219 | NCBIfam | pectinesterase inhibitor domain | 11 | 204 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa06g0978 | Bisa-ChrBisa06 | 33300346 | 33301005 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa06g0978 | 36 | 203 | Carbohydrate Esterase | AT5G53370 | 28.977 | 9.81e-13 | 64.7 |