Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0950 ATGACTCTGCTTCTGTTGTTCCTCTTCCTCGTTTGTGCTTCTCCATCTCATTCCTCTCCGACTGAGCTCCACGCTCTCATGGCTATCAAGCTCTCTTTAGACCCAGAGAACCGCTTTCTGACCTCCTGGACTCCACACTCTGACCCCTGTGGTGGTGCTTTCGAAGGCGTGGCTTGCAACCAGCAAGGCCACGTCACCAATATTTCTTTGCAAGGGAAGGGTCTCTCTGGGACCCTACCAGCGGCTGTGGGTGAACTCAAGAGGTTGACGGGTCTCTACTTGCACTTCAATGCTCTCACTGGGATGATTCCCAGGCAGATTGCCAATTTGAGTGACCTAACTGATTTGTATCTTAATGTCAATAATCTCTCTGGTGACCTCCCTCGTGAGATTGGCAACATGTCTAATCTTCAAGTCTTGCAGCTTTGTTACAACAAATTCGAAGGAAGTATACCAACCGAATTGGGAAACTTGGGGAGGCTCAGTGTTGTTGCTCTGCAATTTAATCAATTGAGTGGCGCAATTCCTGCAAGTTTGGGTGAACTTCAGACCTTAACCAGGTTGGATCTGAGCTTTAACAGTCTTTTTGGTCCAATTCCAGTGACACTAGCTGATGCCCCTACACTAGAATTTCTTGACCTTCGAAACAATTCTCTCTCCGGCAATGTCCCTCCAGGTCTGAAACGACTAAAAGGCGGGTTCCAGTACATGAACAACCCTGGTTTGTGTGGAACAGGATTTACCAATTTAGTTTCTTGCAAAACTTTATTTGACCCCAATAAACCCGAACCATTTGAACCAACTAACGTTTCTACAAAGGATCTGCCAGCGTCAGTTGATCCAAAAGACGAAAACTGCAGTAATGAGGCTCATTGTAAAAAGTCACTGCAATCTTCAAAACTAGGTTTGGTTTTTGGGGTGATCGGAGTTATTGTTGCTTCCACAGTTTCTGGACTTTATGTTTTCGTATGGTACCGTGGTCGGAAACAAAAGATGGGAAGCACAATCAACAGCTCTGATAGTGGAGTGAATAGGAAAAATGCAGCTCGTCTAATCAGTTTGGAGTATTCTAATGGGTGGGATCCATTGGGCAAAGGAAGAAGTGGGTATTCACAGGAAGTCCTGGAGAGTTTTATGTTCAATCTAGAAGAGGTGGAGAGAGTAACTCAATGCTTCTCAGAGGTGAACTTGTTGGGGAAGAGTAATTTTTCAGCTATATACAGAGGAATTCTGAGAGATGGATCAGCTGTGGTTGTGAAGTGCATTAACAATACCAGCTGCAAGTCTGATGAGACTGAGTTCTTGAAAGGGTTGAAGATCCTGACGTTGTTAAAACACGAAAATCTCGTTCGACTGAGAGGTTTTTGTTGCTCAAAGGGCAGGGGAGAATGCTTTCTCATCTATGACTTTGCCTCAAATGGGAGTTTGTCACAGTATCTTGACGTTAAGAGAGGGGATGGTAGGGTTTTGGAGTGGTGCACCAGAGTGTCTATAATCCATGGTATTGCCAAAGGTATTAGTTATCTGCATGGAAAGAAAGGAAGAAAGCAGTCCCTGGTTCACCAGAATATATCAGCTGGAAAAGTGGTTCTTGATATGCATTATAATTCGTTAATTTCAGATTCAGGATTGCACAAACTCCTTGCAGATGATGTTGTGTTCTCCACCCTCAAAGCTTCTGCTGCCATGGGATACCTTGCTCCGGAATATGCGGCCACTGGTTGTCTCACCCAAAAGAGCGACGTTTATGCATTTGGGGTGATTGTTTTTCAGCTTCTTACTGGCAAAAGCGATGTTTCTCAGCTAAATTGCCATCACGCTGAGACTCTTGGATTTGAACATTTGATTGATCCAAACCTTGAAGGCAACTTCTCAGAATTAGATGTTGCTAAGCTATGCAGAATCGCTCTGCTATGCACCAGGGAGTCCCCTTATGAACGACCTTCCATGGACCATGTAGTTCAACAACTGTGTGAAATCTGA 1983 0.4453 MTLLLLFLFLVCASPSHSSPTELHALMAIKLSLDPENRFLTSWTPHSDPCGGAFEGVACNQQGHVTNISLQGKGLSGTLPAAVGELKRLTGLYLHFNALTGMIPRQIANLSDLTDLYLNVNNLSGDLPREIGNMSNLQVLQLCYNKFEGSIPTELGNLGRLSVVALQFNQLSGAIPASLGELQTLTRLDLSFNSLFGPIPVTLADAPTLEFLDLRNNSLSGNVPPGLKRLKGGFQYMNNPGLCGTGFTNLVSCKTLFDPNKPEPFEPTNVSTKDLPASVDPKDENCSNEAHCKKSLQSSKLGLVFGVIGVIVASTVSGLYVFVWYRGRKQKMGSTINSSDSGVNRKNAARLISLEYSNGWDPLGKGRSGYSQEVLESFMFNLEEVERVTQCFSEVNLLGKSNFSAIYRGILRDGSAVVVKCINNTSCKSDETEFLKGLKILTLLKHENLVRLRGFCCSKGRGECFLIYDFASNGSLSQYLDVKRGDGRVLEWCTRVSIIHGIAKGISYLHGKKGRKQSLVHQNISAGKVVLDMHYNSLISDSGLHKLLADDVVFSTLKASAAMGYLAPEYAATGCLTQKSDVYAFGVIVFQLLTGKSDVSQLNCHHAETLGFEHLIDPNLEGNFSELDVAKLCRIALLCTRESPYERPSMDHVVQQLCEI 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0950 660 FunFam Leucine-rich repeat receptor-like kinase 21 130 - -
Bisa06g0950 660 Gene3D Transferase(Phosphotransferase) domain 1 471 660 - -
Bisa06g0950 660 MobiDBLite consensus disorder prediction 264 288 - -
Bisa06g0950 660 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Bisa06g0950 660 ProSiteProfiles Protein kinase domain profile. 392 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0950 660 SUPERFAMILY Protein kinase-like (PK-like) 369 657 IPR011009 -
Bisa06g0950 660 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 65 658 - -
Bisa06g0950 660 Pfam Protein tyrosine and serine/threonine kinase 396 657 IPR001245 GO:0004672|GO:0006468
Bisa06g0950 660 FunFam Protein NSP-INTERACTING KINASE 2 364 470 - -
Bisa06g0950 660 SUPERFAMILY L domain-like 19 230 - -
Bisa06g0950 660 CDD STKc_IRAK 398 660 - -
Bisa06g0950 660 FunFam Protein NSP-INTERACTING KINASE 2 132 254 - -
Bisa06g0950 660 Gene3D Phosphorylase Kinase; domain 1 367 470 - -
Bisa06g0950 660 Gene3D Ribonuclease Inhibitor 11 72 IPR032675 -
Bisa06g0950 660 Gene3D Ribonuclease Inhibitor 73 254 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0950 Bisa-ChrBisa06 31315006 31319022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0950 4 505 Miscellaneous Gene Families AT4G22730 52.091 8.88e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bisa06g0950 PK_Tyr_Ser-Thr 5.6e-37 CL0016