Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0936 ATGCCTCCAAGGAAGAAGTCTAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGAAATCGAATCTGAACAATCAGGCTCAGCCTTCCAAGTTCGGCATTCAGCATTTCTTTGAGCGCCATACCCAGAATGCTCTTCTAGCCTCTCAGAAACAGCCAAAGAATGATGAGAATTCAATTGGCCCCAATTCTGCACCTCAGGATTCCAAATCTGTTGCACCTCCCAGCTCTCGGAGTATTCCATGTGTCACTGGGTCGGAAGCAATTGCCCCGAAAAGTTTAGATTCTGTTATTCCCAGAGCTGGGAATGATTTGAACCCTGAAGTGGTTGGACCGAAAATCGCGAATTCAGAATTGCAAAATCCTAAAGATTACCCTCCATCGCCGGCAAATGAATCTAATGAGTTGTCCCATAATGTACCTTCCGAGAAATCGGGAATACCGAGGTTTAATGCAGCAGAGAATCTCCCTGAGTTATCTCCTGAAATATCTAAGGCTATGCCTCATAAACGTTTTAAGTTCTCGCCTGGGATGTTCATAAAGCAGAGCCAGGATGATGGGGTCGACGAGGTTACATGGAAGATATCACCTGTGAATGAAAGACTCCAAGTAGTTTCAAAACGCATGCCTCAGATAATTCAAGCGTTGGCTGACTCTTCTAGAATCAACTTGTTGCCCATTGGTAACTCAGCAGAGGATAAGGCAAGTTTATGGGGAGCACTAATGTTGAATTTGATGTTATACAGTTCAACAGGCTTGAAAAGGATAAATCCGGATCAAGACATGACTGGTGAACAGAGTCCCTTCAGAACTCCACCATCTTTATCTTATTGCCCTGATAAGGTGAAACTCGCCAGGGACATTGAGCACCATGGACTATCTGACCAGCTTTATTTAAGACACCATAAAAAGGCATTGCTTGAACTATTAGATCAAGTCGAAGACGTCGTTTGTGTTGAAGATACTATTATTTGTAATAAAAGTGCATATAACTCTAAATCGCAAGATGGAATTATTGACAATCTGCCCATCAAAGTTGACCATGCAGTAGAAAGGACAATAGTTCATACACCTAAAGAGGCCGTTGGTGTGTGCAATTCTAATTATTTGGTATTGGAGGTGTCTGAAAAACGTAAGCCAGCTGACTCATCTGCTGCTCAGTGCCCATACAAGGTGCTTCGTTTACTAAATGAACATACTGGACAAGAGCAGGCTGTAAACTTGTGCGAAGAGTGGTGTTACAGTATTATTGCACCTGGAGATACTGTGAATATAGTTGGTCAATTCGATGAACAGGGAAATTGCGATGTAGATCATGATAGTAATTATTTGATTGTACACCCAGATATTCTGGTGTCTGGAACTCGGGTTGCTGCTAGTTTTAATTGTCCAAGGAGAACTGTCTTGGACGAGAGGCTAAAATACAATGAGTACTCAATTGCAGCATTAACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGACTTATGAAGGATAGTCCGACAATAAACTTCTTAGAGGAATATGCACGAGTGGTTCTCCAGAGAAACATTGAGAGCTTATATGCATGTGGAGTAAACGAAAATGATGTTCACAAAACCTTGATTGATGCTATCCCAAGAATATTGAACTGGATCAAACTGTTCAAGAATTCGGAGGAAAGGAAAGATGCTTATGTTGATTTTGGATCTGAAGATGGCATAAAGAAAGTTGACATATCTGAGGTAATTGATATTGAGGAGATGGCATGGGCTTCTAAATATGGTTTGAAAGGGATGATTGATGCCTCTGTCAGCGTGAAAGTTCAACCAATGAAAAATGAAGCAGATGAGAAGATCATGCCATTAGAGTTCAAAACTGGGAAAGCAACCTATAGGCAGTCATCTATTGAACATCGTGCCCAAGTAATCTTGTACACTATCTTGATGTCTGAAAGGTACCAGAAGACTGTTGATTCTGGTCTTCTATATTATCTCCAGTCAGACCAGACAGAGGGAATTGTGGTTCGAAGATCTGACTTAGTTGGGCTAATTATGCGACGTAATGAGCTTGCAAGCGATATTCTGAAGGCATTGACCATGCAACAACTGCCTCCAATGTTACAGAATCCTAGCATTTGCAGAGGTTGTCGCCATCTTAATGTTTGCAGCATTTATCATAAGGTACATGGCGGAAGCACAGAGAGCAGTGGATTGGGAGATATATTTGATTCTCATACTAATCACATTACAGCTGCTCATTCTAAATTCCTCTGTCATTGGGATCGTCTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGTAAAGAAGGAGAAGTGGAGATCACATACTTTTAAGAGTCAGAACAGTGGTGGCATTTCTTCCATTGTTCTTGATGCTTCAAATAAGATTCCATGTCAGAAATCTCTCAAAGATAATCGTTTCATTTATCGTTTTGTACGACATGATCTGTCTTCTTTATCTGAAGTGTCTGATGGTGATCCTTCAGCAAATTATTTAGATCTTAAACTTAGAAGTGGAGACTATGTGATATTGAGCACTGAATGTAGCCGTCAAACTATTGCAAGTGGGGTGATAACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCTTGCGGATTCCAGGGAGCACTTCCACTACACAAGATCTCCTTCAACAAGTTTGGAGAATTGATAAAGATGAAGTTGTGACTTCATTTGCTATTATGAGGTTTAATCTTGTACAACTTTTTCTACAAAATGATCGAAGTGCACATCTACGGAGGATGATTGTTGATCTTGAGGCTCCTAAGTTTGACAGTGGATCTATGGTCAGCCAGGATCCAGCACTATCTTATGTGTGGTCAGAGAAAATTTTGAATGATGATCAACGTAGAGCAATTCTCAAGATACTTATGGCAAAGGATTATGCACTTATACTGGGCATGCCTGGAACTGGGAAGACATCCACCATGGTTCATGCTGTGAAAGCCTTATTGATTAGAGGCACATCCATTTTGCTGACAGCATATACAAACTCTGCTGTAGATAATTTACTTATCAAGTTAAAAGCTCAGGGAATTGATTTTGTACGTATAGGAAGGCATGAAGCTGTGCATGAGGAGGTCAGAGGACACTGCCTTTCAGCAACAAATGTACAAAATGTTGAAGAGATCAAAATAAGGTTAGAACAAGTTAAAGTTGTTGCGGTTACATGTCTGGGCATTACCAGTCCCTTGCTTGCCAACAGGACATTTGATGTATGCATTATGGATGAAGCTGGACAGACAACTCTACCAGTGTCCCTTGGCCCTCTCATTTTTTCCTCAAAGTTTGTACTTGTTGGGGATCATTATCAACTACCTCCACTAGTCCAGAGTACAGAGGCTCGGGAGAATGGCATGGCAATAAGTTTGTTTTGTAGGCTCTCAGAAGCACATCCACAGGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGAACCTGTCAAATTCCTTGATATATGGTGATAGGCTGAGGTGCGGTTCTTCTGTAATAGCTAACGCAAAACTTGAGTTTTATAACTTAAACTGCGGCTTCCCTTGGCTAAAAAATGTTTTGGATCCAGGCCGGCCAGTGATCTTTATTAATACTGATAAACTGCCTGCTTTGGAGGCGAGAGAACAAAAGATTGTACATAACCCTGTTGAAGCTTACATAATTGCTGAGATGGCAAAGGAATTGATAAAAAATGGGATTGGAGAAGAACAGATTGGAATTATTACCCCCTATAATTCCCAGGCAAACCTCATCCGGCAAGCCACTTGCATGACGTCATTGGAGATTCATACCATCGACAAATATCAGGGCAGAGATAAGGATTGCATATTATTATCTTTTGTGAGGTCTAGTGAAAATCCATCAAGCTGTGCTTCTTCTCTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACCCGTGGCAAGAAAAAGCTGATTATGGTGGGCTCTCTTAGAACTCTATCAAAGGTTCCACTGCTAAAGCTTCTCATCAACAAGGTTGAGGAGCAATCAGGAATTTTGAGTGTGTCTAAGAAGGATATCTATCAAAAAGGAGAGCTGAAAAGGTGTTCCCAGATGAGATGA 4146 0.4115 MPPRKKSSSSSSSSSSSSSSSSSSKKSNLNNQAQPSKFGIQHFFERHTQNALLASQKQPKNDENSIGPNSAPQDSKSVAPPSSRSIPCVTGSEAIAPKSLDSVIPRAGNDLNPEVVGPKIANSELQNPKDYPPSPANESNELSHNVPSEKSGIPRFNAAENLPELSPEISKAMPHKRFKFSPGMFIKQSQDDGVDEVTWKISPVNERLQVVSKRMPQIIQALADSSRINLLPIGNSAEDKASLWGALMLNLMLYSSTGLKRINPDQDMTGEQSPFRTPPSLSYCPDKVKLARDIEHHGLSDQLYLRHHKKALLELLDQVEDVVCVEDTIICNKSAYNSKSQDGIIDNLPIKVDHAVERTIVHTPKEAVGVCNSNYLVLEVSEKRKPADSSAAQCPYKVLRLLNEHTGQEQAVNLCEEWCYSIIAPGDTVNIVGQFDEQGNCDVDHDSNYLIVHPDILVSGTRVAASFNCPRRTVLDERLKYNEYSIAALTGTLLHQIFQAGLMKDSPTINFLEEYARVVLQRNIESLYACGVNENDVHKTLIDAIPRILNWIKLFKNSEERKDAYVDFGSEDGIKKVDISEVIDIEEMAWASKYGLKGMIDASVSVKVQPMKNEADEKIMPLEFKTGKATYRQSSIEHRAQVILYTILMSERYQKTVDSGLLYYLQSDQTEGIVVRRSDLVGLIMRRNELASDILKALTMQQLPPMLQNPSICRGCRHLNVCSIYHKVHGGSTESSGLGDIFDSHTNHITAAHSKFLCHWDRLIDLEAKETELVKKEKWRSHTFKSQNSGGISSIVLDASNKIPCQKSLKDNRFIYRFVRHDLSSLSEVSDGDPSANYLDLKLRSGDYVILSTECSRQTIASGVITDISHAHVSVSFSKRLRIPGSTSTTQDLLQQVWRIDKDEVVTSFAIMRFNLVQLFLQNDRSAHLRRMIVDLEAPKFDSGSMVSQDPALSYVWSEKILNDDQRRAILKILMAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVRGHCLSATNVQNVEEIKIRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLIFSSKFVLVGDHYQLPPLVQSTEARENGMAISLFCRLSEAHPQAISALQSQYRMCQGIMNLSNSLIYGDRLRCGSSVIANAKLEFYNLNCGFPWLKNVLDPGRPVIFINTDKLPALEAREQKIVHNPVEAYIIAEMAKELIKNGIGEEQIGIITPYNSQANLIRQATCMTSLEIHTIDKYQGRDKDCILLSFVRSSENPSSCASSLLGDWHRINVALTRGKKKLIMVGSLRTLSKVPLLKLLINKVEEQSGILSVSKKDIYQKGELKRCSQMR 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0936 1381 Gene3D - 888 1159 IPR027417 -
Bisa06g0936 1381 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 1058 1159 - -
Bisa06g0936 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 962 1346 IPR027417 -
Bisa06g0936 1381 FunFam DNA replication helicase 1160 1373 - -
Bisa06g0936 1381 Gene3D - 1160 1368 IPR027417 -
Bisa06g0936 1381 PANTHER DNA2/NAM7 HELICASE FAMILY 10 1357 IPR045055 -
Bisa06g0936 1381 MobiDBLite consensus disorder prediction 127 147 - -
Bisa06g0936 1381 FunFam DNA replication helicase Dna2 569 723 - -
Bisa06g0936 1381 CDD SF1_C_Upf1 1162 1355 IPR047187 -
Bisa06g0936 1381 CDD DNA2_N-like 459 694 - -
Bisa06g0936 1381 Pfam DNA replication factor Dna2 404 606 IPR014808 -
Bisa06g0936 1381 MobiDBLite consensus disorder prediction 1 154 - -
Bisa06g0936 1381 Pfam AAA domain 1138 1337 IPR041679 -
Bisa06g0936 1381 CDD DEXXQc_DNA2 962 1161 IPR026851 GO:0017116
Bisa06g0936 1381 MobiDBLite consensus disorder prediction 1 38 - -
Bisa06g0936 1381 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 904 1053 - -
Bisa06g0936 1381 Gene3D - 459 723 IPR011604 -
Bisa06g0936 1381 MobiDBLite consensus disorder prediction 48 89 - -
Bisa06g0936 1381 Pfam AAA domain 1064 1129 IPR041677 GO:0004386
Bisa06g0936 1381 Pfam AAA domain 962 1053 IPR041677 GO:0004386
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0936 Bisa-ChrBisa06 29422463 29478077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0936 1 1103 Core DNA Replication Machinery Family AT1G08840 53.439 0.0 1105