Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0920 ATGGACGTTCAATTGGATGCCTTGTGCGGGAGACCCTTTTCATTTCACATACACGTACTCACACTGTCACTCTCTCTCAATCTCTCTCTCTCTCTCTCGAGCTTTAGCCATTCATCCATGGAGTTCCAAATAGAAAGCCCAAAACCCAACACAGACCAAGTGGTCATCACAATGGAGCACCCTAAAACGAAAACCCTAAAACGGCTCCACCATTCCAAACCAAGATCCCGTTTTGAAGAAATCAACTACCCACAAAAACCCATCCTCCAATCAGAAGAACACCAGCCCTTGAATTCCCACTCGGGAAACCCTAATTACTCCACCACGTGCACGACCGACGATGACGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGGCTCGAGTACAGCAAAGACGTGGAGGAAAGCATCGGAAAGTACAGAAAGAAGAGGAAAAGGAGGATGAAGAAGAGGGCTATAATAGAATGGAGTTTGTTCCTCATCATCATGACCTTCTTGGTGTGCTCTCTCACCATAGAGTCCCTCCGGAGTAGGCTCCAGTGGGGGCTTCACGTGTGGAAGTGGTGCCTAATGGTGATGGTCATCTTCTGTGGGCGTCTCGTGTCTGGTTGGGTGGTGAGACTCGCAGTGTTCTTCATCGAACGTAACTTCATGCTGCGAGAGAAGGTCCTTTACTTCGTGTATGGCCTGAGAAAGAGCTTCCAAAACTGCGTGTGGCTAGGTCTTGTGTTAGTGGCATGGATGCTCATGTTCCATGACGTCCACAGGCGTCACAAGGTTATCAAGAAGTTCTTCAGAGCCCTCGTCGCCGTCCTCATGGGCGCCACCCTCTGGTTGCTCAAAATAGTTTTTGTCAAAGTTCTTGCGTCGTCATTCCACGTGGCGACTTTCTTTGATCGGATGAAAGAGAGTGTCTTCCACCACTATGTCCTCGAGGCGCTCTCCGGGCTCCCCTTGGAGGACGCCGATCGAGATCTGCCAGGTCAGCAAAGGCACATGCAAGCGTCCAAGTCTTTGCCTGCAAGGCTCAGGTATGGGGCGTCGCAACCATTGACGCCGAGGTCGAGGGGGGAGGGACCGAGGAGGATAGACGTGGAGAAGCTGAAGAGGCTGAGCATGGAAGGGCGGGCGACGGCGTGGAGCGTGAGGAGGTTAGTGAGTCACGTGATGTCGTCAGGGCTGTCAACGATTTCGAGGACCGTTGACGACTTCGCAAACGCTGAGTCGGAGATTACAAGCGAGTGGGAGGCAAGGACTTGCGCTCAGAGGATATTCAAGAATGTTGCCAAGGATGGAGCCAAATACATCGAAGAAGAAGATCTACTAAAGTTCTTGAAGAGAGACGAATTGCACATGATATTTCCTTTATTTGAAGGAGCAATTGAAACTGGAAAGATCACAAAGTCTTCATTTCGAAATTGGGTGGTGCATGCTTACATAGAGAGGAAAGCTTTGGGCCATTCGTTGAACGACACAAAGACGGCAGTTCATCAACTACACAGGCTGGCGAGTGCAGTGGTGGTGGTCATCATCACTGTGGTCTCTCTTCTGGTGATGGGTTTGGCCACCACCAAGGTCATCTTCGTGGTCACGTCCCAGCTCTTGCTGGTGGGCTTCATGTTCCAGAACATGTGCAAGACTGTTTTCGAGTCCATCATTTTTGTGTTCGTCATGCACCCTTTCGACGTGGGAGATCGATGCGTGGTCGATGGCGTCCAGATGATAGTGGAAGAGATGAATATATTGACAACAGTGTTTTTAAGATACGACAATGAGAAAATATATTATCCCAACTCTGTGCTTCTCACAAAACCTATCAGCAATTTCAGAAGAAGCCCCGATATGACTGATGCTGTGGACTTCACGATTGATGCTTCTACCCCCATCCACACTATCACTGCCCTCAAGAAGGCCATACAAGCGTACATGGAAAGCAAACCCAAGTACTGGAGCCCAAAACACACTGTTATTGTAAAGGAGATAGAGAATGTAGACAAGATGAAGATGTGTCTGTGTGTTCAACACACCATCAACCATCAAAACACTGGCGAGAGGAATAGTAGAAGATCCGAGCTTTTGCTCGAACTGAAGAAAATCTTTGAGAGCCTTGGGATCAAGTATCGTCTTCTTCCTCAAGAAGTTCATCTCACTCAAGTTAACTTGAGAAATGGAACCTTTCCGCTTCCATCTTAA 2202 0.485 MDVQLDALCGRPFSFHIHVLTLSLSLNLSLSLSSFSHSSMEFQIESPKPNTDQVVITMEHPKTKTLKRLHHSKPRSRFEEINYPQKPILQSEEHQPLNSHSGNPNYSTTCTTDDDAEEEEEEEEEEEEWLEYSKDVEESIGKYRKKRKRRMKKRAIIEWSLFLIIMTFLVCSLTIESLRSRLQWGLHVWKWCLMVMVIFCGRLVSGWVVRLAVFFIERNFMLREKVLYFVYGLRKSFQNCVWLGLVLVAWMLMFHDVHRRHKVIKKFFRALVAVLMGATLWLLKIVFVKVLASSFHVATFFDRMKESVFHHYVLEALSGLPLEDADRDLPGQQRHMQASKSLPARLRYGASQPLTPRSRGEGPRRIDVEKLKRLSMEGRATAWSVRRLVSHVMSSGLSTISRTVDDFANAESEITSEWEARTCAQRIFKNVAKDGAKYIEEEDLLKFLKRDELHMIFPLFEGAIETGKITKSSFRNWVVHAYIERKALGHSLNDTKTAVHQLHRLASAVVVVIITVVSLLVMGLATTKVIFVVTSQLLLVGFMFQNMCKTVFESIIFVFVMHPFDVGDRCVVDGVQMIVEEMNILTTVFLRYDNEKIYYPNSVLLTKPISNFRRSPDMTDAVDFTIDASTPIHTITALKKAIQAYMESKPKYWSPKHTVIVKEIENVDKMKMCLCVQHTINHQNTGERNSRRSELLLELKKIFESLGIKYRLLPQEVHLTQVNLRNGTFPLPS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0920 733 Gene3D - 563 612 IPR023408 -
Bisa06g0920 733 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 35 722 IPR016688 -
Bisa06g0920 733 FunFam Predicted mechanosensitive ion channel 563 612 - -
Bisa06g0920 733 SUPERFAMILY Sm-like ribonucleoproteins 553 612 IPR010920 -
Bisa06g0920 733 PIRSF Memb_At2g17000 26 730 IPR016688 -
Bisa06g0920 733 MobiDBLite consensus disorder prediction 112 132 - -
Bisa06g0920 733 MobiDBLite consensus disorder prediction 89 132 - -
Bisa06g0920 733 Pfam Mechanosensitive ion channel 507 709 IPR006685 GO:0016020|GO:0055085
Bisa06g0920 733 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0920 Bisa-ChrBisa06 28437281 28445280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0920 49 723 Mechanosensitive Ion Channel Family AT5G12080 46.254 0.0 603