Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0915 ATGGCTTCTCCACCTCCTTTGACATTAAACGTCGTCGGATCAGGCTCTTACACCGGCAGTACCACTTCCGATTCCGGTGCTTCACCTCAACGCTCATCCGCACTGCAAAACCTCAGTCCCAGCATTCTCATTATCGTAATCGTCCTAGCCGTCACCTTCACTCTTTCCCTTGCTATCTGTTTACTCCTCCGCCACCTCAATCTCCGCTGTCTCCGACGCCTGTTTCCGTCTTCATCGGGTAATGCGATGCCGGCGACTGCAGCTTCCACGCCTGTGTTCTCTTCAGGCCGGCGTGTCTCGCCGGAAATCCCTTCGGCTTCCATCGTTGACTCGCTCCCCTTGTTCACGTTCTCTTCCATCACTCGCCGGTCCTCCACCGACGCCACCGCCAGCGGTGATGGCGACTGCGCCGTTTGCCTCGCGAAATTCGAGCAGCGCGACCTGCTCCGCCTCCTCCCGCTCTGTTGCCATGCCTTCCACGCCGAATGCATCGATACCTGGCTTCAGTCGAATCTCACCTGTCCGCTCTGCCGATCCGCCATTGTCGCCTCTGATTCGGACCTCATGAAGGTTCTCCGATCATCTTCCGCCGATAGTTTCCGGCTCGAAATTGGAAACATCAGCCGCCGTGGAACCGCACCGGACACCGTCGGAGAAGTCCGGTCGAGGTCTTATTCAGTAGGATCGTTCGAGTATTTTGTGGACGAGAACTTCGAGCTTCCTATCAGCCACGCTCACCGGAGGAGTGTATCGGAAAACAAGGACGAGACGGTGGTGGTAGAATCGCAGGCGCCGGCTCAGCCGGTTTATGAGGCGAGCTTAGCCGCCGAAGTAGCTGCCAGTGGAAGGAGCTGGCTGAAGGAATACTTCGATAGGCTCTCGTCTTCAATATCATCTCGAACGGTGTCGTTTCGAAGCTCTGGAAGGTTCTTCACTGGTGGTGGCAGCCACCGAAGCGACACCTTCTCCGCCGAGGACTATGACGTGGAAGTCAACAGACTAGGAGAAGAAATCAGCGAAACTTTTCGATGGCTCTCAGGGGTATGA 1047 0.5635 MASPPPLTLNVVGSGSYTGSTTSDSGASPQRSSALQNLSPSILIIVIVLAVTFTLSLAICLLLRHLNLRCLRRLFPSSSGNAMPATAASTPVFSSGRRVSPEIPSASIVDSLPLFTFSSITRRSSTDATASGDGDCAVCLAKFEQRDLLRLLPLCCHAFHAECIDTWLQSNLTCPLCRSAIVASDSDLMKVLRSSSADSFRLEIGNISRRGTAPDTVGEVRSRSYSVGSFEYFVDENFELPISHAHRRSVSENKDETVVVESQAPAQPVYEASLAAEVAASGRSWLKEYFDRLSSSISSRTVSFRSSGRFFTGGGSHRSDTFSAEDYDVEVNRLGEEISETFRWLSGV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0915 348 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 34 247 - -
Bisa06g0915 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 187 IPR013083 -
Bisa06g0915 348 Pfam Ring finger domain 135 178 IPR001841 -
Bisa06g0915 348 CDD RING-H2_EL5-like 135 178 - -
Bisa06g0915 348 FunFam E3 ubiquitin-protein ligase ATL6 95 184 - -
Bisa06g0915 348 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Bisa06g0915 348 SMART ring_2 136 177 IPR001841 -
Bisa06g0915 348 SUPERFAMILY RING/U-box 118 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0915 Bisa-ChrBisa06 28183518 28184564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0915 37 202 C3H Transcription Factor Family AT4G28890 34.286 1.28e-21 93.6