Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0905 ATGGCTTCGCCTTCTTCGCCGATCGATTCCACACCGCCGTCAGGTCCGCCATCGGCCGTGCCCCTTCCCCTCCCGGCGCCGCCCTCGTCGCGTCGCCTTCCGCCGCCGTGTTGGTCGCACGATGAGACCGTCGCGCTCATCGACGCGTACCGTGACAAGTGGTATTCCCTCGGCCGGGGCAATCTCAAGGCGACGCACTGGCAAGAGGTCGCCGATGTGGTCACCAGCCGGTGCCCTAACGCGTCTCCGCCGAAAACTGCGGTGCAGTGCCGCCACAAGATGGAGAAGCTACGCAAGCGGTACCGCACCGAGATCCAGCGGGCGCGATCCTTGCCCGTTGCCCGATTCAATTCGTCTTGGGTCCATTTCAAGCGCATGGATTCCATGGAGAAAGGCCCTTCGCCGGTCAAGCCTGAGAATAATTCCGATAGCCCCGATGAGATGGAACACGAAGACGACGATGAAGATCAAGATTTGTACGAGGAATTCAAGAACGGCAGTGGGTCCAACACGCGGAGCTTGAATAAATTGTATAGGAACGGAATTGGAGGAGGTCCCGACAGCGGCGTAGGTGGAGGAGGGTTTCGGATTCGAATTCCGACTGGAGTGAGCATCGCGCAACATGGTACAAAGTTTTATGGGAAGCTTGCTGATCAGAAATTTAATCCTAATTCAAACTCTGCTGCACCTAGCTCCAATTGCAGCCCCAATTATGGTACAAGGGTTTTGAAAGAGAGAAGCGGATTGGGGAAAAGGGAGAGAGAGAGGGACCCAGTGGGTGAGATGGTGACTGCAATTAAGGTTTTGGGAGATGGGTTTGTGAGGATGGAGCAGATGAAAATGGAGATGGCAAGGGAGATTGAGACTATGAGGATGGAGATGGAAATGAAACGTACTGAGATGATTTTGGAGTCCCAACAACGAATTGTGGAGGCATTTGCGAAGGCTGTTTCGGAGAAGAAGAAGAAGGTAAAGAGAATGCCATCACCACCGGAACAATAG 1002 0.5429 MASPSSPIDSTPPSGPPSAVPLPLPAPPSSRRLPPPCWSHDETVALIDAYRDKWYSLGRGNLKATHWQEVADVVTSRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKRMDSMEKGPSPVKPENNSDSPDEMEHEDDDEDQDLYEEFKNGSGSNTRSLNKLYRNGIGGGPDSGVGGGGFRIRIPTGVSIAQHGTKFYGKLADQKFNPNSNSAAPSSNCSPNYGTRVLKERSGLGKRERERDPVGEMVTAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKKVKRMPSPPEQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0905 333 Coils Coil 91 111 - -
Bisa06g0905 333 Gene3D - 38 103 - -
Bisa06g0905 333 MobiDBLite consensus disorder prediction 9 34 - -
Bisa06g0905 333 FunFam Trihelix transcription factor ASIL2 38 103 - -
Bisa06g0905 333 MobiDBLite consensus disorder prediction 127 173 - -
Bisa06g0905 333 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 18 319 IPR044823 -
Bisa06g0905 333 MobiDBLite consensus disorder prediction 145 160 - -
Bisa06g0905 333 SMART 118neu2 45 134 IPR006578 -
Bisa06g0905 333 MobiDBLite consensus disorder prediction 1 35 - -
Bisa06g0905 333 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0905 Bisa-ChrBisa06 27866281 27867282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0905 37 129 Trihelix Transcription Factor Family AT3G14180 38.710 2.12e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa06g0905 Myb_DNA-bind_4 5.8e-21 CL0123