Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0873 ATGTCGGAAATTGCACCTCCGCTGGCCCTCCTACGGCGACCCACGGCGATTAAGAAGTTGCTCTTCAATGCTGATTCCACAAGTGAGTTGTGGGATGAGGGACTCATGGAGAGAATTCCTAGAGGGATAAGGGACTCATGGAGGGAATTCTTGGAGGGATTTGACTTTGAGTATGAAAACTCTTCTACTTACTCAAAGGTTCATGATTTTCGTAAATCTTATTTTCAGGCTGAGGTTAAGTCATATGTCTACGTAAGTTGTGGCCTTTGGTATGGGGTGGACCATTCCGGGCTGGAAGCATTCTTGACGGGATATCATCCAAATACTGCGAAGCTTATTGGATGTGATGCAAGAGGAAAGCACCTTGTGTTTCGGCTATCTAAACTGGGAAGCTTAGGATCTCTTCTTCATGGTTCAAATGATACCAAACTAGACTGGAGTAAAAGGTATAACATTGCTCTAGGCATGGCTGATGGCCTCCTCTACCTTCATGAGACTTGTCATAAGCGAATCATTCACAAAGATATTAAGTCAAATAATATCCTACTCACAGAAAATTATGAGCCCCAGAGTCAGAAAAATGTGAGAAACAGAGTCTCTGACAGTGTTACACCATCAACGTATTTTGCTCCAGAATATTTCATGCATGGCATAGTTGATGAGAAAACCAACGTTTATTCTTTTGGGGTTTTACTCTTGGAAATCATATTTGGGCGTCCAGCTGTAGATGAAGATCAGCTTAGTGTTGTAATATGGGCCAAGCCTTTTTTCGATTGCAATAATGTTAAGGAGCTCGCCGATCCCGCTCTTTGCAATGACGATCGAGAAGAGATGGACTATGTCATTCTGACTACGTTTCTATGTGTTGAGCACTCTCCTGTCTTACGTCCCTCTATGAGTCAGGCAATCTCTAATGCAAAGGGCTTCGTTGGCATTGTTAGCTCAAGTCGCCGACTCAGGGTGGCAAGCTTGTCGGAGGTCTCTGAGGGTCAATTCGACCAGAGGTGTTAG 1011 0.4402 MSEIAPPLALLRRPTAIKKLLFNADSTSELWDEGLMERIPRGIRDSWREFLEGFDFEYENSSTYSKVHDFRKSYFQAEVKSYVYVSCGLWYGVDHSGLEAFLTGYHPNTAKLIGCDARGKHLVFRLSKLGSLGSLLHGSNDTKLDWSKRYNIALGMADGLLYLHETCHKRIIHKDIKSNNILLTENYEPQSQKNVRNRVSDSVTPSTYFAPEYFMHGIVDEKTNVYSFGVLLLEIIFGRPAVDEDQLSVVIWAKPFFDCNNVKELADPALCNDDREEMDYVILTTFLCVEHSPVLRPSMSQAISNAKGFVGIVSSSRRLRVASLSEVSEGQFDQRC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0873 336 SMART serkin_6 58 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0873 336 PANTHER OS08G0249100 PROTEIN 106 305 IPR046958 -
Bisa06g0873 336 ProSiteProfiles Protein kinase domain profile. 1 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0873 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bisa06g0873 336 SUPERFAMILY Protein kinase-like (PK-like) 105 304 IPR011009 -
Bisa06g0873 336 Gene3D Transferase(Phosphotransferase) domain 1 128 316 - -
Bisa06g0873 336 Pfam Protein tyrosine and serine/threonine kinase 105 302 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0873 Bisa-ChrBisa06 26866148 26873042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0873 106 308 Receptor kinase-like Gene Family AT1G56120 38.009 6.22e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa06g0873 PK_Tyr_Ser-Thr 3.6e-18 CL0016