Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0849 ATGACGAATCTTTCTGAATCACTTCAAGCATACCTGCTTCAACATGATCCTACTGCCTCCGTCACTCTCATGAATAATAATGGTTTATTCCCATACAATCCCACTTCTTCAACCCCTAATTTCATTGATGATTCCTCGGAGCAGGGCGGCACCGTGTTTTCCGGCGAGCATGATAGCACAATGAACCTCACAATCACAAGCATGGAGACAAATGATCCTAGGGTTAGTATTCATAATGCAGGAACTGTGGCGCGTGAAGTGAACACGCCACCCAGGTGGAAGAATTACCGGGGTGTGAGGCGTCGGCCGTGGGGAAAGTTCGCAGCGGAGATTCGGGACCCGAAGAGGAATGGCGCGAGGATATGGCTGGGGACTTATGAGAGGGAAGAGGATGCAGCTTTGGCTTATGATAGGGCTGCTTTTAATATGCGCGGCAGAAAGGCCAAGCTGAATTTTCCACACCTCATTGGGTCGGACAGCCCACCGGAGCCAGCCGGTAGAGTCATCCGGCAGAAGCGCCAGTCGCTGGAGCCTTCGTCTCCTTCATGTTGCACATCTGAGGAAGATAGCTCTCAAGGATCAAAGAGGAGAAAGAGCCTGGCTGGTTTATTGAATAAGCTAGCCAAGAATACAAGTCAAGTAAAAAATTTGAAATGGTGTTAA 663 0.4932 MTNLSESLQAYLLQHDPTASVTLMNNNGLFPYNPTSSTPNFIDDSSEQGGTVFSGEHDSTMNLTITSMETNDPRVSIHNAGTVAREVNTPPRWKNYRGVRRRPWGKFAAEIRDPKRNGARIWLGTYEREEDAALAYDRAAFNMRGRKAKLNFPHLIGSDSPPEPAGRVIRQKRQSLEPSSPSCCTSEEDSSQGSKRRKSLAGLLNKLAKNTSQVKNLKWC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0849 220 SUPERFAMILY DNA-binding domain 95 154 IPR016177 GO:0003677
Bisa06g0849 220 PRINTS Ethylene responsive element binding protein signature 135 155 IPR001471 GO:0003700|GO:0006355
Bisa06g0849 220 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Bisa06g0849 220 ProSiteProfiles AP2/ERF domain profile. 95 153 IPR001471 GO:0003700|GO:0006355
Bisa06g0849 220 FunFam Ethylene-responsive transcription factor 2 94 154 - -
Bisa06g0849 220 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
Bisa06g0849 220 MobiDBLite consensus disorder prediction 173 189 - -
Bisa06g0849 220 CDD AP2 94 155 IPR001471 GO:0003700|GO:0006355
Bisa06g0849 220 PANTHER DNA-BINDING DOMAIN 70 194 IPR044808 GO:0003700|GO:0009873
Bisa06g0849 220 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Bisa06g0849 220 MobiDBLite consensus disorder prediction 152 197 - -
Bisa06g0849 220 Pfam AP2 domain 95 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0849 Bisa-ChrBisa06 25830126 25830788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0849 91 188 AP2-EREBP Transcription Factor Family AT2G44840 70.000 5.22e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g0849 AP2 1.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g0849 06 25830126 25830788 Bisa06g0849 06 25830126 25830788 ECH