Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0782 ATGGATACACCTTCGACCTCCCAAAGAAAACAGAAGAAGCTGTCTTTTTTTAAAGTATTGATGAAGGACTTCTCTTCTCAGTTGCAAATCCCACCAGCTTTCATCAAGTATTTTGGTAAGCACGTGCCAAATAAAACAACACTACGTGAGGCTTATAATCATGACAAATCTTGGGAAGTTGAAGTGGAAAAGCTCGAAAAAAATTATTATTTCAGAAAGGGATGGGGAGAATTTGCAGAAGATAACAGTCTGGAACATAGGGACTTCCTGACCTTCAAATATGCCCCACATTCTTCAAAATTCAAGGTCACTATCTATGACATAACTTGCTGTCCGAAGAAACTTAATGTGCCTAGACCAGAAAGATGTTCTGAACTTCTTAACGTTGGAGAAGAACACAGAAATATACATGACCGAGGAAAAAGAAAGAGGCTTGAGGTTGAAGATGATGTCAACGAAATTGGAGAATTGAAAGGTGCAAGAAGGAGAAAGAGAGAATTTGATGGAGCTAAAGCTTATGAAAGGGATGTTATTCGTATAGATTCTGATTCTTCTGACGAGGATCAAACTGGGGACTTGAAGCAGTCAACTTGCAGACAGAGAAGTAAAACAGAGAGTATTGAAGGCCATAAAGCATTCAAGAGAAGTGGAAAATGCAACATATTGACTTCTTATGAACAAATAGAATTCAAATCTCAGTATCCTTTCTTCCAAGTTCGAATCAAGTTCTCAAATATCAGTGGTGGTTATCTGCACATACCAAGTAACTTTTACAGAGAACACATGATCAAGAAAAACAAGGATGTGAAATTTCAGAGATCCAACAAAATTTGGCCTGTGGGTCTCCAGGTGATCCCCAGACATGGAAAAAACATGAAGGAAGCCAGATTGAGTCGGGGATGGAGGGACTTCATGAGGCAAAATGGTCTCCAAATTGATGATGTTTGCATCTTTGAGATGAACTCAAATGGGGATTTTGTTGTCTTCAATGTTCACCTTTATCGATGGGATATTCACAAGGCGGAGTTTAATTTTTGCAAACAATATAGCGACGGCAAGTCAAACCAATTCATATTGTCCCATTTGCGAAGAGCTCGAATAGATATTCGAAGTGTCTTTTGGCGTGAAAGCCCAAAACCCCTCCACACACTCCACGACTCGGACAACTCCACAATGGATTCGAACTCTTCTCCTTCAAACACAATACCTGTGAACGGCACAATCCCCGTTGCTTCGAACAGCAACCCTCCTCCTCCGGTCGATGCTTCCTCCGATGATCGGAAACCCATCGCTTTGTGGCCGGGAATGTACCATTCGCCGGTCACAACCGCTCTGTGGGAAGCAAAGTCGAAGATCCTGGTGAGGCTGCTTGACCCACCGAAAGATGCCCCTCCACAAAGTGAATTGCTCACTAAAACTCCGTCGCAGAGCAGGACGTGTATACTGTATAACTTCTCATCGGATTTTATTCTGAGAGAGCAGTATAGGGATCCCTGGAATGAAGTGCGAATTGGGAAATTGCTTGAAGATCTTGACGCCTTAGCCGGAACTATTTCGGTCAAGCACTGTTCTGATGATGATAGCACAACAAGGCCACTTTTACTGGTCACTGCTTCTGTAGACAAGATTGCACTGAAGAAGCCAATTACTGTTGATATTGATCTCAAAATAGTTGGTTCTGTTATATGGGTTGGGCGATCCTCAATTGAGGTTCAGCTGGAGGTCACTCAGTCCAAAGAAGAGTGCTGTGATGCTTCAGACGCAGTGGTACTAACTGCCAACTTAGTATTTGTTGCTCGGGACTCTAAAACTGGGAAGGCTGCTCCGGTAAATCGACTTTCAACAGAAACTGAACTTGAAAAGTTACTTTTTGAACAACGTGAAGCGAGAAATAATTTGAAAAAAAGGAAAAGAGGGGAGAGGAAGGAGTTTGAGAATGGGGAAGCATATAAACTTAAGTCCCTATTGGCTGAAGGAAGAATTTTCTGTGATATGCCTGCCTTGGCTGACCGTGACAGCATTCTTCTAAGGGATACCCGCCTTGAGAACTCTTTGATATGCCAGCCACAGCAACGAAACATCCTTGGTCGAATCTTTGGAGGATTTTTGATGCATCGAGCATTTGAATTGGCTTTCTCAACGGCATATGCTTTTGCTGGATTAGTTCCTTGCTTTCTTGAAGTTGATCATGTTGATTTCTTAAAACCTGTTGACGTTGGGGATTTCTTGCGTTTCAAATCCTGTGTTTTGTACACAGAACTTCACAATCCAGATCAGCCGCTGATCAATGTTGAAGTTGTTGCTCATGTTACTCGACCGGAGCTGCGATCTAGCGAGGTGTCGAATACTTTCTATTTCACTTTCACAGTACGTCCTGAAGCAAAGGCAATGAAAAATGGTCTGAAACTTCGAAATGTGGTACCGGCAACCGAGGAAGAAGGTCGCCTAATATTAGAGCGAATGGATGCCGATAGCTTGCAATGA 2484 0.4251 MDTPSTSQRKQKKLSFFKVLMKDFSSQLQIPPAFIKYFGKHVPNKTTLREAYNHDKSWEVEVEKLEKNYYFRKGWGEFAEDNSLEHRDFLTFKYAPHSSKFKVTIYDITCCPKKLNVPRPERCSELLNVGEEHRNIHDRGKRKRLEVEDDVNEIGELKGARRRKREFDGAKAYERDVIRIDSDSSDEDQTGDLKQSTCRQRSKTESIEGHKAFKRSGKCNILTSYEQIEFKSQYPFFQVRIKFSNISGGYLHIPSNFYREHMIKKNKDVKFQRSNKIWPVGLQVIPRHGKNMKEARLSRGWRDFMRQNGLQIDDVCIFEMNSNGDFVVFNVHLYRWDIHKAEFNFCKQYSDGKSNQFILSHLRRARIDIRSVFWRESPKPLHTLHDSDNSTMDSNSSPSNTIPVNGTIPVASNSNPPPPVDASSDDRKPIALWPGMYHSPVTTALWEAKSKILVRLLDPPKDAPPQSELLTKTPSQSRTCILYNFSSDFILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSTTRPLLLVTASVDKIALKKPITVDIDLKIVGSVIWVGRSSIEVQLEVTQSKEECCDASDAVVLTANLVFVARDSKTGKAAPVNRLSTETELEKLLFEQREARNNLKKRKRGERKEFENGEAYKLKSLLAEGRIFCDMPALADRDSILLRDTRLENSLICQPQQRNILGRIFGGFLMHRAFELAFSTAYAFAGLVPCFLEVDHVDFLKPVDVGDFLRFKSCVLYTELHNPDQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAKAMKNGLKLRNVVPATEEEGRLILERMDADSLQ 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0782 827 Pfam B3 DNA binding domain 16 106 IPR003340 GO:0003677
Bisa06g0782 827 Pfam B3 DNA binding domain 236 326 IPR003340 GO:0003677
Bisa06g0782 827 CDD BFIT_BACH 485 611 - -
Bisa06g0782 827 MobiDBLite consensus disorder prediction 384 411 - -
Bisa06g0782 827 Gene3D Hotdog Thioesterase 481 651 - -
Bisa06g0782 827 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 676 818 IPR029069 -
Bisa06g0782 827 ProSiteProfiles Hotdog acyl-CoA thioesterase (ACOT)-type domain profile. 481 603 IPR033120 -
Bisa06g0782 827 Gene3D - 222 337 IPR015300 -
Bisa06g0782 827 CDD B3_DNA 15 107 IPR003340 GO:0003677
Bisa06g0782 827 PANTHER ACYL-COA THIOESTERASE 419 825 - -
Bisa06g0782 827 MobiDBLite consensus disorder prediction 179 209 - -
Bisa06g0782 827 ProSiteProfiles B3 DNA-binding domain profile. 236 334 IPR003340 GO:0003677
Bisa06g0782 827 ProSiteProfiles B3 DNA-binding domain profile. 13 109 IPR003340 GO:0003677
Bisa06g0782 827 CDD B3_DNA 235 328 IPR003340 GO:0003677
Bisa06g0782 827 ProSiteProfiles Hotdog acyl-CoA thioesterase (ACOT)-type domain profile. 677 794 IPR033120 -
Bisa06g0782 827 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 486 637 IPR029069 -
Bisa06g0782 827 SUPERFAMILY DNA-binding pseudobarrel domain 11 111 IPR015300 -
Bisa06g0782 827 FunFam Acyl-coenzyme A thioesterase 9, mitochondrial 668 827 - -
Bisa06g0782 827 CDD BFIT_BACH 678 793 - -
Bisa06g0782 827 Gene3D - 7 111 IPR015300 -
Bisa06g0782 827 MobiDBLite consensus disorder prediction 383 425 - -
Bisa06g0782 827 FunFam Acyl-coenzyme A thioesterase 9, mitochondrial 483 650 - -
Bisa06g0782 827 SUPERFAMILY DNA-binding pseudobarrel domain 232 332 IPR015300 -
Bisa06g0782 827 Gene3D Hotdog Thioesterase 669 826 - -
Bisa06g0782 827 SMART B3_2 236 335 IPR003340 GO:0003677
Bisa06g0782 827 SMART B3_2 16 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0782 Bisa-ChrBisa06 24124292 24135445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0782 405 824 Acyl Lipid Metabolism Gene Families AT2G30720 64.539 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa06g0782 B3 3.2e-13 CL0405