Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0778 ATGATTCTGAATAGCCGAATTTTCAGTGTTAATGTTATTTCTATTAATTTCTGGCTGCTGCTTAGTTGTATCATGACCTATGGGACTGACACTGATATCTTCTGCTTGAGAAGTATAAAAGATTCACTTGAAGACCCATTCGGTTATTTGAAATCTTCCTGGAATTTCAACAACAACACAGAAGGATTTATCTGTAGATTTACTGGGGTTGAATGTTGGCACCCTGATGAGAACAGAGTCTTAAATCTCAAGCTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTACTATTCAAAACTGCTCAAGCTTAACAGGATTAGATTTTTCAATTAACAAATTGTCTGGGACAATTCCAGCAGATATCAACGTCCTTCTTAAATTTGTGACAACTCTTGATCTCTCTTCAAATGACTTCACTGGCCAGATCCCCAAGGCCCTTTCAAACTGTAGTTATCTTAATTCTATTAAGCTTGACCAAAATCGACTCACCGGGCAAATCCCTGGAGAGTTGAGCTTGCTCGCTCGGCTTCATATGTTCACCGTCACCAACAACCTTTTGACAGGGCCGGTTCCAAACATACAAGTCGCAGCAGATAGTTATGCTAATAATCAAGGACTCTGTGGTGGTCCGTTGCCCGCTTGCCAGGGTAAGGCTTCCAAGAGTAATTCTGCAGTTATAGCCGGAGCGGCTGTTGGTGGGGTGGTTATTGCAGCATTGGGAATAGGTATTGGATTGTTCTTCTTTGTGCGCCAAGTTTCTGTGAGGAAGAAGGAAGAGGACCCAGAAGGAAACAAATGGGCAAGAAGTCTAAAGGGAACTAAAAAAATAAAGGTTTCAATGTTTGAGAAGTCAGTTTCGAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAAAAGCAACATTATTGCGTCTGGAGGAACAGGAACTGTATACAAAGCTGTCCTTGACGATGGCACATCACTCATGGTTAAGAGATTACAGGATACTCAACACTCAGAGAAAGAATTTCTGTCTGAGATGTCTACACTGGGGACTGTCAGGCATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCGTTGCCAAGAAGGAGAGACTCTTGGTTTATAGAAATATGCTGAATGGCACTCTTCATGATCAGCTACATCCTGCTGAAGGTCAGAGTACCATGGAGTGGCCTTTGAGGCTTAAAATTGCAATCGGGGCAGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAACCCCCGTATCATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGTCTTGCAAGACTGATGAACCCAATCGATACACATCTGAGTACTTTTGTGAATGGGGAATTCGGAGACTTAGGTTATGTTGCTCCTGAGTATACAAGAACATTGGTGGCTACGCCTAAAGGGGATGTTTATAGCTTCGGGACTGTTCTTCTTGAGTTAGTGACTGGTGAAAAACCTACCCATATCTCTAAAGCTCCAGAATCGTTCAAGGGAAATTTAGTAGAATGGATTACGCAACTCTCAAGCAACTCTCAAATCCAGGATGCCATTGATGAATCATTAGTTGGGAAGGGTGTCGATCATGAGCTTTTCCAATTTCTTAAGGTTGCATGCAACTGTGTTTCACCAACTCCAAAGGAAAGGCCTACTTTGTTTGAAGTATACCAGCTTCTTAGAGCCATTGGGGATAGATACCATTTTACAACTGAGGATGAGATATTCGTACCTACAGATAGTGGGGATATTGATAATTTAGGGGAACTTATTGTAGCTCAAGAAGGGGATGATTTAAAAGGTATGTGA 1854 0.418 MILNSRIFSVNVISINFWLLLSCIMTYGTDTDIFCLRSIKDSLEDPFGYLKSSWNFNNNTEGFICRFTGVECWHPDENRVLNLKLSNMGLKGQFPRTIQNCSSLTGLDFSINKLSGTIPADINVLLKFVTTLDLSSNDFTGQIPKALSNCSYLNSIKLDQNRLTGQIPGELSLLARLHMFTVTNNLLTGPVPNIQVAADSYANNQGLCGGPLPACQGKASKSNSAVIAGAAVGGVVIAALGIGIGLFFFVRQVSVRKKEEDPEGNKWARSLKGTKKIKVSMFEKSVSKMKLSDLMKATNNFSKSNIIASGGTGTVYKAVLDDGTSLMVKRLQDTQHSEKEFLSEMSTLGTVRHRNLVPLLGFCVAKKERLLVYRNMLNGTLHDQLHPAEGQSTMEWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGEKPTHISKAPESFKGNLVEWITQLSSNSQIQDAIDESLVGKGVDHELFQFLKVACNCVSPTPKERPTLFEVYQLLRAIGDRYHFTTEDEIFVPTDSGDIDNLGELIVAQEGDDLKGM 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0778 617 Pfam Protein tyrosine and serine/threonine kinase 304 574 IPR001245 GO:0004672|GO:0006468
Bisa06g0778 617 Gene3D Phosphorylase Kinase; domain 1 262 374 - -
Bisa06g0778 617 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 376 595 - -
Bisa06g0778 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 54 193 - -
Bisa06g0778 617 Gene3D Ribonuclease Inhibitor 30 216 IPR032675 -
Bisa06g0778 617 CDD STKc_IRAK 307 575 - -
Bisa06g0778 617 SUPERFAMILY L domain-like 31 195 - -
Bisa06g0778 617 CDD TM_EGFR-like 227 258 - -
Bisa06g0778 617 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Bisa06g0778 617 ProSiteProfiles Protein kinase domain profile. 301 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0778 617 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 375 - -
Bisa06g0778 617 Gene3D Transferase(Phosphotransferase) domain 1 376 592 - -
Bisa06g0778 617 FunFam Nuclear pore complex protein NUP107 29 193 - -
Bisa06g0778 617 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
Bisa06g0778 617 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0778 Bisa-ChrBisa06 23878503 23880885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0778 15 591 Receptor kinase-like Gene Family AT3G28450 47.009 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Bisa06g0778 PK_Tyr_Ser-Thr 8.1e-37 CL0016