Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0682 ATGGAACCTGGCTTCTCACTTACTCCCTCTGGCAATCCATTGTATTCCCCTTCTCGTCAATTTGCATTTGGCTTTTATCAGCAAGGCGATGGCTTTGAAGTTGGAGTTTTCATGGCGAAACAAAATGGTACAGTTGTATGGACTACAAGCCGCGATGATCCTCCTGTCTCCTCAAATGCGAAGCTTCAGCTAACCAAGGATGGCAAGCTTGTTCTCCAAACAGGGGATGGACAAGTCGAGAAGCACATTGCTAATCCTCATAACACGACCGCTTCCTCTGCCTTAATGCTTGATTCTAGGAACATGGTGCTACACGACAATCATTCCAGGGTCATTTGGCAGAGTTTCGATCACCCAACTGATACTATTCTAGGGGGTCAAATCCTACATACTGGGGCTCAGTTGGTCTCTAGCTCATCACGGACCGATCATTCTTCTGGACTATCTGGTCTGAATATGCAGGGAGATGGAAACCTTGTTCTGTATGCATCAATAACAGATAAATCGAATGCTTACTGGGTCTCTGATACCCATTATAACTTCCTTGTCTCCTTGTATCTGTATCTCAATGTAATAGGTTCTCTGCTGATCGCGAATAGCAGCAATCTGGAAACGATCAAAGTTTTGAGAAGTTCTTCACCTTCTTCGGACAAAACCATATTTCGAGCAACCCTTGATTATGATGGAGTTTTTCGGTTGTATGCTCATGGTGACGAGTACAGCAACCAAGATCAAAATCGAAAGACTCTTGGCTGCAAAAGGAACTTTCCAGTTGCGGAATATTGCAGATCTGAGGAAGATAATGCAACCTCGCATGAAAATCTGTCCACAATGCATAATTTAAGCTGGGATTTATATCCTTATTCCGTTGAAGCAATGCCACAAGAAAAATGCGGATTGTCTTGTTTGGAGGATTGTTATTGTGGGGTTGCTGTTTATCAAGACGGACCCTACAAAAAAGAACAGCTTTTCTCCAGCCACATAATTCACAATATTCGAGTTTTAAGGTACAAAAGGCTGGGGGAGATTGGAGATTTGGGCCTGAATGAAGGACTCATTCTCAGGGTATTTTCATACAATGAGCTGAAAAGAGCAACAAATGGCTTCGCACAAGAGTTGGGTAAGGGGTCTTTTGGAGCAGTTTATAAAGGCACTTTAAACAAAGGAAGGAGAGTGATTGCAATAAAGAGACTAGAGAAGTTAGTTGAACAAGGAGAGAGGGAATTTCAAGCAGAAATGCGAGCCATGGGGAAAACCCACCACCGCAACCTGGTTCACTTGCTAGGAAGAAACATATCGGTCGATGTTCCAGATCCAGACCAAATTGTTCTTTCCAACTGGGTGTACAAGTTCTTTGTTGGAAGAGAGGTAAAGAAGCTTGTTGTCGGAGAAGATGTGGATAACAACTTGCTGGAGAATATGGTTAAAGTGGGATTATGGTGTATTCAAGATGAGTCCTTTCTACGCCCATCAATGAAGAGTGTGGTGCTGATGCTAGAAGGGGTTACTGATGTAGCTATTCCTCCATGTCCCTCTGCTAACATAATGTGA 1551 0.432 MEPGFSLTPSGNPLYSPSRQFAFGFYQQGDGFEVGVFMAKQNGTVVWTTSRDDPPVSSNAKLQLTKDGKLVLQTGDGQVEKHIANPHNTTASSALMLDSRNMVLHDNHSRVIWQSFDHPTDTILGGQILHTGAQLVSSSSRTDHSSGLSGLNMQGDGNLVLYASITDKSNAYWVSDTHYNFLVSLYLYLNVIGSLLIANSSNLETIKVLRSSSPSSDKTIFRATLDYDGVFRLYAHGDEYSNQDQNRKTLGCKRNFPVAEYCRSEEDNATSHENLSTMHNLSWDLYPYSVEAMPQEKCGLSCLEDCYCGVAVYQDGPYKKEQLFSSHIIHNIRVLRYKRLGEIGDLGLNEGLILRVFSYNELKRATNGFAQELGKGSFGAVYKGTLNKGRRVIAIKRLEKLVEQGEREFQAEMRAMGKTHHRNLVHLLGRNISVDVPDPDQIVLSNWVYKFFVGREVKKLVVGEDVDNNLLENMVKVGLWCIQDESFLRPSMKSVVLMLEGVTDVAIPPCPSANIM 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0682 516 SUPERFAMILY Protein kinase-like (PK-like) 355 430 IPR011009 -
Bisa06g0682 516 Gene3D - 119 283 - -
Bisa06g0682 516 ProSiteProfiles Bulb-type lectin domain profile. 1 117 IPR001480 -
Bisa06g0682 516 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 430 511 - -
Bisa06g0682 516 SMART blect_4 5 119 IPR001480 -
Bisa06g0682 516 Gene3D - 1 117 IPR036426 -
Bisa06g0682 516 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Bisa06g0682 516 Coils Coil 395 415 - -
Bisa06g0682 516 Pfam D-mannose binding lectin 44 129 IPR001480 -
Bisa06g0682 516 ProSiteProfiles Bulb-type lectin domain profile. 120 246 IPR001480 -
Bisa06g0682 516 Pfam Protein tyrosine and serine/threonine kinase 370 431 IPR001245 GO:0004672|GO:0006468
Bisa06g0682 516 Gene3D Phosphorylase Kinase; domain 1 353 437 - -
Bisa06g0682 516 CDD B_lectin 10 119 IPR001480 -
Bisa06g0682 516 ProSiteProfiles Protein kinase domain profile. 367 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0682 516 FunFam Serine/threonine-protein kinase 119 246 - -
Bisa06g0682 516 SUPERFAMILY alpha-D-mannose-specific plant lectins 141 240 IPR036426 -
Bisa06g0682 516 SUPERFAMILY alpha-D-mannose-specific plant lectins 45 136 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0682 Bisa-ChrBisa06 20544597 20548489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0682 344 435 Trihelix Transcription Factor Family AT1G68690 51.064 3.91e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa06g0682 B_lectin 6.8e-17 No_clan