Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0680 ATGGCTTCCACACTTACTCTGTTCTTGCTGTTCCTAATGCTACCTGCAACTGAACTTATAGCTGAAAAAAACCAAGCCAACATCATAAGCTTGGGTTCTTTGCTCTCCCCAAAAATTAGCTCTACTTCATGGGTCTCAGCGTCTGGTCATTTTGCTTTCGGCTTTTATAAACAGGGTAATGGCTTTGCTATTGGGATATGGTTAACTACTAAACCTAATATCACAGTTGTCTGGACAGCTAACCGCGACAGCCCACCCCTTTCCGCTGATTCTACACTGCAGTTTACTGCAGATGGTTTGCTGCTCCATCGAAGTGAGAAACAGAAAGAAAAACTTGCCATCGCTAATGTGTCAACGCCTGCGGTTTCGGCATCTATGCTTGATTCCGGCAACTTTGTGCTTTACGGTAATGATTCTGATGTTCTCTGGCAAAGCTTTGATTCCCCGACTGACACCATATTAGGAAATCAGAGTTTATCTCGGGGACAGAAACTGGTCTCTAGTATGTCCAAATCAGACCAATCATCTGGACATTTCACTCTCATTATGCAGGAAGATGGAAATCTTGTCGCTTATCCTGTAAACAGCTCAAGGGCTTCAAATGATGCTTACTATAAGGTATTGAATTATTTAACTGACTCAGCACTTCATCTTGATTCTGAAGGTCTTCTTTGCGTACGGGATCTTGATATGAATTCCATCCTCAGTGTTTTGGCCAACAGCACCACATACCCTGGAAAAAACACAACTAGTCCAGTCTACCGCGCAAGACTTGAGGAAGACGGGATGTTTCGATTATATCAACACCGAGTTGAGGAAAATAATGGGTTCATTGTGCAAATGGTGTGGTCGGCTCCGCCAGACCCATGTCAAGTAAAGGGGCGTTGCGGCCTCAACAGGTATTGCTCCACCCTAAAAGGTAGCACTGTATGTGAGTGCATTCCTGGATTCGTGCCCCTCAACGGTAGTGACATGGAGGACTGCGAACAGAACCACGGCAAAGTTGATTGTGAAAGCAGTGCAGAACCCCAGATGCCTTACAAAGTCACTTACTTGCAAAATATGTGGTGGAGTGGTTATTCTTATTCCGCTCAACTAATGAAGAAGGAAGCTTGTGGCAAGTCTTGCCAGGAAGACTGTGATTGCGGGGCAGTATTATATTCGAACGGCAGCTGCCAAAAATATGCGCTTCCGCTTATATATGGCAGAATGTCTCCAAATAACACATCATCAGCCACGGCCCTCTTTAAGGTGCCTTCAGGAAATATAGTTACTCCAAACCACACCACCACGCCAGTTCAATCGAAGATCGTCATTGACAACAAGAAAAAAATGATTTTGATTTTAGTCTTGACATTGGGTTCAGTTTCGTTCTGTACTTTGGTCTTAGCAATATCTATTTTATTCATCCATAAGCGTCAAGTTTATTCATATGAAAAGCTATCTGCAGCTGCAAATATCAGATTTACGGAGGAATGTAGTGTACGCACCTTTACCTTTGATGAACTTGTGGAATCAACAGGGGACTTCAAAGAAAAGATCGGTGGAGGATCTTCTGGAGAAGTTTACAGGGGCATAATGAGTGGAACTAACAGAAATATTGCTGTCAAGAAACTAGATAGAGTTATAGATGAAGGGGAGAGAGAATTTCAAGCTGAAATTACAACAATTGCTCGAACTCATCACAGGAATTTGGTTCAGCTTATTGGAAGACCCGGCATTGCGTCCTTCGATGAAGAATGTCGTCTTGATGTTGGAAGGGTTGAAAAGTATTCAAACCCCTCCATCCCCAACCCTCTTTAG 1803 0.4332 MASTLTLFLLFLMLPATELIAEKNQANIISLGSLLSPKISSTSWVSASGHFAFGFYKQGNGFAIGIWLTTKPNITVVWTANRDSPPLSADSTLQFTADGLLLHRSEKQKEKLAIANVSTPAVSASMLDSGNFVLYGNDSDVLWQSFDSPTDTILGNQSLSRGQKLVSSMSKSDQSSGHFTLIMQEDGNLVAYPVNSSRASNDAYYKVLNYLTDSALHLDSEGLLCVRDLDMNSILSVLANSTTYPGKNTTSPVYRARLEEDGMFRLYQHRVEENNGFIVQMVWSAPPDPCQVKGRCGLNRYCSTLKGSTVCECIPGFVPLNGSDMEDCEQNHGKVDCESSAEPQMPYKVTYLQNMWWSGYSYSAQLMKKEACGKSCQEDCDCGAVLYSNGSCQKYALPLIYGRMSPNNTSSATALFKVPSGNIVTPNHTTTPVQSKIVIDNKKKMILILVLTLGSVSFCTLVLAISILFIHKRQVYSYEKLSAAANIRFTEECSVRTFTFDELVESTGDFKEKIGGGSSGEVYRGIMSGTNRNIAVKKLDRVIDEGEREFQAEITTIARTHHRNLVQLIGRPGIASFDEECRLDVGRVEKYSNPSIPNPL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0680 600 Gene3D - 149 289 - -
Bisa06g0680 600 SUPERFAMILY Protein kinase-like (PK-like) 491 570 IPR011009 -
Bisa06g0680 600 Gene3D Phosphorylase Kinase; domain 1 494 581 - -
Bisa06g0680 600 Pfam D-mannose binding lectin 75 161 IPR001480 -
Bisa06g0680 600 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 192 IPR036426 -
Bisa06g0680 600 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 273 IPR036426 -
Bisa06g0680 600 Gene3D - 27 147 IPR036426 -
Bisa06g0680 600 FunFam Serine/threonine-protein kinase 149 278 - -
Bisa06g0680 600 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 570 - -
Bisa06g0680 600 Pfam S-locus glycoprotein domain 249 319 IPR000858 GO:0048544
Bisa06g0680 600 ProSiteProfiles Protein kinase domain profile. 508 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0680 600 ProSiteProfiles Bulb-type lectin domain profile. 30 147 IPR001480 -
Bisa06g0680 600 SMART blect_4 156 285 IPR001480 -
Bisa06g0680 600 SMART blect_4 26 149 IPR001480 -
Bisa06g0680 600 Pfam Protein kinase domain 511 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g0680 600 ProSitePatterns Protein kinases ATP-binding region signature. 514 538 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0680 Bisa-ChrBisa06 20392681 20395052 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0680 418 583 Receptor kinase-like Gene Family AT2G43700 30.723 1.62e-16 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa06g0680 S_locus_glycop 5e-07 No_clan