LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa06g0678	ATGTCACAAGAAAACTGCCGATTGTCTTGTTTGGAGGATTGTTATTGCGGGGTTGCTATTTATCAAGAGGGGCGCTGCAAAAAACAACAGCTTCCATTGAGGTATATGAACTGGAGTTTGGAAAATTCACCAACGTCATTCTTTAAGGGGGACGATATAAGCCAGAAAAGCTTGAACAATAAAACAAATTCTAAACCACAACCTCACCAACCGCCTCTGATCAAGACCACTAGCAACACTGCAATCCTGCAGATTATTCTTGTCATCTCAGCTTCTGGTTTTCTTTTCTGTTCATCCATTGCAGTCTCCCACCACATAATTTACAAGATTCGAGTTTTAAGGTACAGACGGCTGCGGGAGATTGGAGATTTGGGGTTGAATGAAGGACTCATTCTCAGGGTATTTTCATACAATGAGCTGAAAAGAGCAACAAATGGTTTCGGACAAGAGTTGGGCAAGGGGTCTTTTGGAGCAGTTTATAAAGGCACTTTAAACAAAAGGAGTGTGATTGCAGTGAAGAGACTCGAGAAGCTAGTAGAAGAAGGAGAGAGGGAATTTCAAGCAGAAATGCGAGCCATCGGGAAAGCCCACCACCGAAACTTGGTTCGCCTACTGGGGTATTGCGCTGAGGGCTATAAAAGACTTTTGGTTTATGAGTACATGAGCAATGGTTCCTTGGCAAACCTTATTTTTGGGGACCAAAGACGTCCAGATTGGGATGACAGAAAAAGAATAGCACTGGATGTTGCAAGGGGAGTCCTGTATCTCCATGAGGAGTGTGGTGCCCCGGTGATTCATTGTGACATAAAGCCTGAAAACATATTGATGGATGAGTTCTGGACAGCCAAAATATCTGACTTTGGACTCGCAAAACTTCTAATGCCTGATCAGACAAGGACCTTCACTATGGTTAGAGGGACAAGAGGATACTTAGCCCCAGAGTGGCAGAAGAATACCCCAATCACAGTGAAGGCAGATGTTTTTAGCTATGGAATAATGATATTGGAAATTGTCTTTTGCAGAAGAAACATATTAGTCAACGTTCCAGATCCAGACCAAGTTGTTCTTTCCAATTGGGTGTACCGGTGCTTTGTTAGGAGAGAATTGAAGAAGTTTGTTGCAGGGGAAGACGTGGATAACATGTTGCTGGAAAATATGGTTAAAGTGGGATTATGGTGTATTCAAGATGAGCCCTTTCTTCGCCCATCAATGAAGAGTGTGGTGCTAATGCTAGAAGGGGTTACTGATGTAGCTATTCCTCCTTGTCCCTCTACTAATTCTATGTGA	1287	0.4305	MSQENCRLSCLEDCYCGVAIYQEGRCKKQQLPLRYMNWSLENSPTSFFKGDDISQKSLNNKTNSKPQPHQPPLIKTTSNTAILQIILVISASGFLFCSSIAVSHHIIYKIRVLRYRRLREIGDLGLNEGLILRVFSYNELKRATNGFGQELGKGSFGAVYKGTLNKRSVIAVKRLEKLVEEGEREFQAEMRAIGKAHHRNLVRLLGYCAEGYKRLLVYEYMSNGSLANLIFGDQRRPDWDDRKRIALDVARGVLYLHEECGAPVIHCDIKPENILMDEFWTAKISDFGLAKLLMPDQTRTFTMVRGTRGYLAPEWQKNTPITVKADVFSYGIMILEIVFCRRNILVNVPDPDQVVLSNWVYRCFVRRELKKFVAGEDVDNMLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVTDVAIPPCPSTNSM	428

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa06g0678	428	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	264	276	IPR008271	GO:0004672\|GO:0006468
	Bisa06g0678	428	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	2	423	-	-
	Bisa06g0678	428	Pfam	Protein kinase domain	148	406	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g0678	428	SUPERFAMILY	Protein kinase-like (PK-like)	131	412	IPR011009	-
	Bisa06g0678	428	Gene3D	Transferase(Phosphotransferase) domain 1	221	419	-	-
	Bisa06g0678	428	ProSiteProfiles	Protein kinase domain profile.	145	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g0678	428	Coils	Coil	172	192	-	-
	Bisa06g0678	428	Gene3D	Phosphorylase Kinase; domain 1	120	220	-	-
	Bisa06g0678	428	SMART	serkin_6	145	400	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g0678	428	FunFam	S-receptor-like serine/threonine-protein kinase	122	220	-	-
	Bisa06g0678	428	ProSitePatterns	Protein kinases ATP-binding region signature.	151	173	IPR017441	GO:0005524
	Bisa06g0678	428	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	221	419	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa06g0678	Bisa-ChrBisa06	20384660	20385946	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa06g0678	135	421	Receptor kinase-like Gene Family	AT5G20050	41.234	1.71e-68	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Bisa06g0678		Pkinase	1.8e-47	CL0016