Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0671 ATGGGAGAGAGAGGGAGAGGAGTTCGCCGGCGACATAGTTCATCCCATAGTTCGGCCAAGATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGTCAGCCTGCTATGACTAAGCTATCAAGCAACAAGACAGTCAGGAGAGTTCGTGTAAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACAGGCAATTATTCATGGGGTAGTGAAGCTGTAACCCGCAAGACACGTTTACTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACTCTGGTGAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCATTCAAGCAGTGGTACCTTCAACATTATGGCATTGATCTTGGTAGGAAGAAGAAAACAGCTGCCAAGAAGGACTCTACAGAGGAGGGTGAAGCTCCAGTTGAAGAGACGAAGAAAAGTAACCATGTGCTGAGAAAGCTGGAGAAGCGTCAGAAAGATCGTAAGCTTGATCCCCACATTGAAGAGCAGTTTGGTGGTGGTCGATTACTGGCTTGCATTTCTTCTCGACCTGGTCAATGTGGCCGGGCAGATGGTTACATATTGGAAGGGAAGGAGCTGGAATTTTATATGAAGAAAATTCAAAGGAAGAAGGGGAAGGGTGCAGGTGCTGCTTGA 720 0.4764 MGERGRGVRRRHSSSHSSAKMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPAMTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGIDLGRKKKTAAKKDSTEEGEAPVEETKKSNHVLRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0671 239 FunFam 40S ribosomal protein S8 181 234 - -
Bisa06g0671 239 Gene3D - 47 232 - -
Bisa06g0671 239 Pfam Ribosomal protein S8e 25 216 IPR022309 -
Bisa06g0671 239 CDD Ribosomal_S8e_like 25 216 - -
Bisa06g0671 239 FunFam 40S ribosomal protein S8 52 180 - -
Bisa06g0671 239 MobiDBLite consensus disorder prediction 31 45 - -
Bisa06g0671 239 PANTHER 40S RIBOSOMAL PROTEIN S8 21 234 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bisa06g0671 239 MobiDBLite consensus disorder prediction 1 45 - -
Bisa06g0671 239 ProSitePatterns Ribosomal protein S8e signature. 31 50 IPR018283 GO:0003735|GO:0005840|GO:0006412
Bisa06g0671 239 NCBIfam ribosomal protein eS8 21 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bisa06g0671 239 Gene3D Ribosomal protein S8e, subdomain 128 195 IPR042563 -
Bisa06g0671 239 FunFam 40S ribosomal protein S8 129 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0671 Bisa-ChrBisa06 20179539 20182695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0671 21 239 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 82.727 7.88e-125 351