Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0588 ATGAAAATAGCAGGTCACCGGAGCATAGCGCTTTATGGTGAAATGCCAGCAGCACAGGCGCTCGCCGGATTAACCCTCGAGGACGTGCTAGCCAACAGAGCCGCCGCGGAAGCGTCGAGCAACCAGCTCAGCAGCACCGGCCACCGACTAACCCTCCTCGACATCATCCGCGAGGACGAGTCCAACAAGAAAGATCGCAGATCTTGGAAAGCCTTCAAAGACAAGCTTCGCCTGAAGCGCGCCGGCGCTGCTTGGACCTCCTCCATCGTTATCCCTACCTCGGATATCCCTCTCACTATCCAGCATCCCAAACACCTCTCTCAGGCCCCGCGTCGTAGCTCCGTCCGAATCCTCACCTTTTCCGCCGCTGACGTCACCACTCACTACATGGCAGACCCTCCTTACGACGACGTCGTCAAGGCCCCAAGCGAGGCCACGCCCACCTTCACGCGCACCAGCTCCGCGCGCCAGGTCGGGGACGCCTCCTTCGAAGAGAAGCTCGGGCGCCCAAACTCCGCGCGCCTGGCGGCCGCGGTGCGTGCCGATTCCATCCGCCGGGAGCGCGTGGTGACATTTCGGGATCACCTAGAGGATGATGAAGACGACGACGGGTGCTCGTTTGGTCGTCCGAAGGAGGAGAGGCAGATGTCCGCGAGGGAAGCTGTGGCGGCGCAGGAGGCGGCGGAGGCTGCTGCGGCGGCGGCGTGGAAGGAGGACGAGGACGAGGACGAGGACGAGGAAGAGGAGGAGTCGGGGGCTCGAGGTGGGGCGGTGACGATGTCGCTGATGGACTTGCTGGAGGAGACGGACAGGCAGATGGGGCTGGAGGGGTCGAGGTACAGGATGGAGGACGACGACGAGGAGTGCGAGGAGGATGAGGAGGAGGAACAAGAAGGGGAGGCGGAGCTGAACTGCTGCGTGTGCATGGTGAAGCATAGAGGTGCTGCGTTCGTGCCTTGTGGCCACGCCTTTTGCAGGATGTGCTCCAGGGAGCTCACCGTCACCAAGGGGAATTGTCCTCTCTGCAACAATTTCATTTTGGAAATTCTTGAAGTTTTCTAA 1062 0.6149 MKIAGHRSIALYGEMPAAQALAGLTLEDVLANRAAAEASSNQLSSTGHRLTLLDIIREDESNKKDRRSWKAFKDKLRLKRAGAAWTSSIVIPTSDIPLTIQHPKHLSQAPRRSSVRILTFSAADVTTHYMADPPYDDVVKAPSEATPTFTRTSSARQVGDASFEEKLGRPNSARLAAAVRADSIRRERVVTFRDHLEDDEDDDGCSFGRPKEERQMSAREAVAAQEAAEAAAAAAWKEDEDEDEDEEEEESGARGGAVTMSLMDLLEETDRQMGLEGSRYRMEDDDEECEEDEEEEQEGEAELNCCVCMVKHRGAAFVPCGHAFCRMCSRELTVTKGNCPLCNNFILEILEVF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0588 353 SMART ring_2 305 342 IPR001841 -
Bisa06g0588 353 Coils Coil 282 302 - -
Bisa06g0588 353 MobiDBLite consensus disorder prediction 236 251 - -
Bisa06g0588 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 353 IPR013083 -
Bisa06g0588 353 Pfam Zinc finger, C3HC4 type (RING finger) 303 346 - -
Bisa06g0588 353 PANTHER OS01G0917900 PROTEIN 18 353 - -
Bisa06g0588 353 ProSiteProfiles Zinc finger RING-type profile. 305 343 IPR001841 -
Bisa06g0588 353 MobiDBLite consensus disorder prediction 202 219 - -
Bisa06g0588 353 MobiDBLite consensus disorder prediction 195 259 - -
Bisa06g0588 353 SUPERFAMILY RING/U-box 304 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0588 Bisa-ChrBisa06 16990978 16992039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0588 18 353 C3H Transcription Factor Family AT3G07120 42.119 5.62e-58 190