Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0520 ATGAGCCATGTGGAACGCAGAACAACTCTGCGTTTAGGGGATAAAGACGCAAAAACGCATGCACTACAGCACCGAACTGTAGACAGCAGCAGAGCACTGCAGGGGAAGAGTGTTGGAGAAGCTTTCCGAACGGCCATTCAGAGAGAAGCGTCACGTCTCCGACGGGGAAGAAGCAGAACATCTTGGAGAGAAGCAGCAGGTCTTCTACGGCAGGTGGTGAAAGAAAAGAATCGAAAAACAGAAGAGAACGTCACCGGAAGAGGGAGCAGAAAGCTGAAAGAGAACGAAGAGGTCTTGAGCAGCGCGGTTTTGGAGATGCATCTGATGGTGGATCACAAAGAGAATCAGTCTCCTCAAGGCCAAACAGCTCTAGTTTTGATTGAATTTTTGGGAGTGGCAATTACTGCTGTTGTTTTTCTCAAGGGGGTTTACCATTCCTGTGCTTTTGAGAGGACACGGTATATGAATGTGGTGGTTCAAAGGGCTCGCCATCCTGAGCTCAAATATTATATACTCACAGCTGTTTCAGAACTTCTTATCTTTTTACAACAGGGAATGGTAGAAAGAGTAGCAGTTATATTCTTAAGAGCTGACAATGTTCCACTGGAGAAATTTGTATTTAAGCTTGCATTGAACCAATCTTATGGCTCAAAGGTGGAAGAGGCTGACCTGGAGCTCTCTCCAAGATCTTTACTGATGAAGCTTTTAGTCTCAGAATCTCTTACTAAGAATCTTCCCCATGGGACGTGGTGGAGTCCTGTGCACCATTCCTTCGTTCTCGACAGGGAACCTTTGATGCCTCCTGACCCCAACACTTGTGCTTCTTTTGGGAATTTCGTGTGCCTTTCACGCTGGCTCAGGAGACAGCGGCTCACGAACTGGAGGAGCGTTGGGCCTATTGGGGCTACTCGAAGCTGGTGGTGGCGCTTGACGGCGATGCTAATTTGTACGCTCGATAAGAAGCCCAACACGCTGATTTGGCTTTGGATCAGCAACTATGCAGTGCAGTTTTTGGTTCATGTGGTGCTTTTGTGGCTCGAGTATAGGAGAAGGAACAAGTTGATTTGGCGGAGGCGGATGGTCAAGACGGGGATACGGCTGGAATTTCTCTCTATTCTCAAGGATAGTGATGTAAATGTAGCGTGTTTTCCATCCGGAAGAGGCGATTGCGAGTGGGAGATAACTGCATACTCTAGATCCCTTCCAGAGGCTGGTACAAGCGACAATACAGAATTATGGATCCCAACCGACACAAATCAAGAAGGAACCAGGAGAGCCTTCCTCCTTTGTTTAAGAGTAGCATTGGAGTTTCTGGTTGACTTCATAGGAGATAAGGTCCTCATAGGAATCCCCAACAAGTCCTTTCTCAGCATGCTCAGAGGAAAGAGCAACGAAGTAAAGGGCTGTAGTGCATCATAG 1419 0.4736 MSHVERRTTLRLGDKDAKTHALQHRTVDSSRALQGKSVGEAFRTAIQREASRLRRGRSRTSWREAAGLLRQVVKEKNRKTEENVTGRGSRKLKENEEVLSSAVLEMHLMVDHKENQSPQGQTALVLIEFLGVAITAVVFLKGVYHSCAFERTRYMNVVVQRARHPELKYYILTAVSELLIFLQQGMVERVAVIFLRADNVPLEKFVFKLALNQSYGSKVEEADLELSPRSLLMKLLVSESLTKNLPHGTWWSPVHHSFVLDREPLMPPDPNTCASFGNFVCLSRWLRRQRLTNWRSVGPIGATRSWWWRLTAMLICTLDKKPNTLIWLWISNYAVQFLVHVVLLWLEYRRRNKLIWRRRMVKTGIRLEFLSILKDSDVNVACFPSGRGDCEWEITAYSRSLPEAGTSDNTELWIPTDTNQEGTRRAFLLCLRVALEFLVDFIGDKVLIGIPNKSFLSMLRGKSNEVKGCSAS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0520 472 ProSiteProfiles HORMA domain profile. 120 314 IPR003511 -
Bisa06g0520 472 MobiDBLite consensus disorder prediction 1 25 - -
Bisa06g0520 472 SUPERFAMILY The spindle assembly checkpoint protein mad2 119 252 IPR036570 -
Bisa06g0520 472 MobiDBLite consensus disorder prediction 1 30 - -
Bisa06g0520 472 Gene3D HORMA domain 119 263 IPR036570 -
Bisa06g0520 472 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 119 246 IPR045091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0520 Bisa-ChrBisa06 13595811 13602922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0520 288 352 C3H Transcription Factor Family AT1G68070 42.857 7.00e-09 55.5