Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0509 ATGGTGGTGGTAATAGAGCAGGATGAAGCTGAGGAGCAAGTAGTGAATTCATCTGAAACTGCTAAATCTGCAAAATCTGCGGCCTCCTCCAATGGCGATGGCAATAAGGATGCTTCCGATGGCTTTGAAACTGCCAGCGACGCCGAGCTCGGCAGCGACGGAGAGGATGACGACTCCGGCGCTTGCAGTCGCGGTGGGGATGCGCATAAAGAACAGGGACAACAGCATCATCATCAGGAGCAGGAGCAGGGAATTCCTCCGAGAAGTGAATCTTCCGAAGATGCCCAAAACAACGAGGAATTGAAACAGAAAGCATTGGCTCAAGCAAATGATGCAAAACTAGAAGGGAATAAGTTGTTTGGAGATGGGCAATATGAGGAGGCACTATCAAAGTATGAGCTCGCTTTACAAGTTGCTCCAGACATGCCTTCATCTGTGGAAATACGCTCCATATGCCATTCAAATCGCGCTGTATGCTTTATGAAAATGGGGAAATATGAAGACACAATTAAAGAATGCACTAAAGCATTAGAGCTCAATCCTGTATACATGAAAGCTTTGGTGAGGAGAGGAGAGGCTCATGAAAAGCTTGAACATTTTGAAGAGGCCATTGCTGATATGAAGAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAATCCATTCGTCGACTGGAACCCCTGGCAGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATTGCTAAATTGAAAGATATGGGCAATTCTTTGTTGGGCCGCTTTGGGATGAGCGTGGACAACTTCAAAGCTGTTAAAGATCCAAACACTGGTTCCTATTCTGTCTCATTCCAACGCTAA 846 0.4539 MVVVIEQDEAEEQVVNSSETAKSAKSAASSNGDGNKDASDGFETASDAELGSDGEDDDSGACSRGGDAHKEQGQQHHHQEQEQGIPPRSESSEDAQNNEELKQKALAQANDAKLEGNKLFGDGQYEEALSKYELALQVAPDMPSSVEIRSICHSNRAVCFMKMGKYEDTIKECTKALELNPVYMKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKSIRRLEPLAAEKREKMKEEMIAKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSVSFQR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0509 281 Coils Coil 95 115 - -
Bisa06g0509 281 ProSiteProfiles TPR repeat profile. 184 217 IPR019734 GO:0005515
Bisa06g0509 281 Gene3D Tetratricopeptide repeat domain 69 247 IPR011990 GO:0005515
Bisa06g0509 281 MobiDBLite consensus disorder prediction 1 100 - -
Bisa06g0509 281 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 37 281 - -
Bisa06g0509 281 ProSiteProfiles TPR repeat profile. 109 142 IPR019734 GO:0005515
Bisa06g0509 281 Pfam Tetratricopeptide repeat 152 181 IPR001440 GO:0005515
Bisa06g0509 281 MobiDBLite consensus disorder prediction 14 37 - -
Bisa06g0509 281 SMART tpr_5 109 142 IPR019734 GO:0005515
Bisa06g0509 281 SMART tpr_5 184 217 IPR019734 GO:0005515
Bisa06g0509 281 SMART tpr_5 150 183 IPR019734 GO:0005515
Bisa06g0509 281 SUPERFAMILY TPR-like 108 228 IPR011990 GO:0005515
Bisa06g0509 281 MobiDBLite consensus disorder prediction 57 84 - -
Bisa06g0509 281 Pfam Tetratricopeptide repeat 185 217 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0509 Bisa-ChrBisa06 12733347 12737746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0509 109 240 Calmodulin-binding Proteins AT3G25230 37.143 4.56e-15 73.2