Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0494 ATGAATGGTGGAGTGGAATTGCAAGTGGGAGATCTCTTTGAAGAAGAAGAAGCAGTTATGGCGGCAGTTAATGAGAGAGAGACCTGGCTTCAGAATTATAACAAAAATGGTGAAAATGATGATGATCTTCTTGCTGGCGTACTGGACGACGATGCTTCTATGTTCTACAATGACGACGACGACTTGAACTTCCATCTTCTTCCCGATTTCCCGTGCATGTCGTCTTCCTCATCCTCATCCTCTACGCCAGGCCCAGTCAAAACCGTCACGTGCATCCCCTCCTCATCCTTCAAAACGACGTCGTCTTCCGCCGACTGTTTGACCAATCCCAAGTCAGACGCAGAGGATCCTGTCCCACCGCCACCCCCACCCCCACCACCACCATCAGCATCAGCATCAGCGTTATCCTCCACTGCCTCTATGGAGATCCTGCAGCCGCCGGCCCACGGCGGCGCTGACGTCGACGGCGGAGATTGTTTAGACATGATGGACACATTTGGGTACATGGAACTTCTGGAAAGTAACGATTTCTTCGACCCTTCATCCATCTTTGAGAATGACGAAAATCCATTGGAGGAATTGCAACAGTTAGAGCAACAACAGCAAGAACTGCCGCCACAAATGGAGAGAGGGAGGGACGAAGAACTGAGCTCAGTGTTCTTAGAGTGGCTAAAGACGAACAAGGAGCGCGTGTCGGCGAGTGACCTGAGGAGCGTGAGGCTGAAGAAGGCCACGATAGAAAGCGCGGCTAACCGTCTGGGTGGAGGCAAGGAAGGCATGAGGCAGTTGTTGAAGCTCATTCTCGATTGGGTTCAGACCAGTCATCTTCAGAACAAAAGAAGCAGAGAAAATCACACCAATAATGACAACAATAACAATAATAACAACAATTGTAATAATTATAATTATAATTATGATCTTCTCACGAATCAATTTCAGGATGACCGATACCCTAGCTCCAATTTCTACTTGAACCACCAGTCTTCATTAGGACCCGAGTGGATCTCCCCGTCGCCATACTCGGCGGATCCGGCGGTTCCGGCACCGTTTCCGCAGGTGGCGACCAGCTATAATGCGGGCGATCCGTATCCAAATGGAGCTTCTAGCGAGTTTCGCATGCTTGAATCTTCTCATTCATGGCCTCATTCCGATCCGTTCACTGTTAACGTTGCTCCTCCTCCGACGGCGACTCACTATAGCAATATTTTCTACCCGCCGCCGCCGTATCTGTGTCAGTTTTTTCAAGACTCCGGCGGCGCCGATGGAGAGATGAGGCTAGGTCCGTCGGCGACGAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGACGGTGTTTATCTCATCACAGGCGTGATAATCACCATGACCAACAGAACCAGGAGGAGCATCAGACTGGAGCAGCGCATGCAAATCCGGTTAACTGGTTGTATTGGCCGCCGATTATGGCCGCCAGTGGTGGTGCTGGTTCTGTTGCGCTGGTGGTTCCGGATGAGCCACCGTCGGGAAGACACCTGGATGATCGGAAGGGCATGCAAACCCACCAGAATTATCAACAGAGCCGGGTGTCATCGGAAAAGCGACAGGCTGAGAAGAACTTGAGGTTCCTTCTGCAGAAGGTGTTGAAGCAAAGCGATAAAGAGGCAGAAACCCATTTGCCAGAACTGGAGGCGAGAGATGGCATTTCTATAGCAATGGAAGATATTGGAACTTCTCGTGTTTGGAATATGCGCTACAGATATTGGCCAAACAACAAAAGCCGGATGTATCTGCTTGAGAATACAGGAGACTTTGTGAAAGCTAATGGGCTCCAAGAAGGAGACTTCATAGTAATATACAAAGATGTAAAGTGTGGGAAATTTATGATAAGAGGTGTAAAAGTAAGGCAAGCAGGAGCGAAACCGGAGAAAAAGAAAGCAGGAAAATCCCAGAAAAACCAACACGGGAGTGATCATCATCATGCTCATGCCTCGCCATCTCCATTCAATACTCAAACGCAGAAGCATGAGAAGAACAGTCAAATTCAGTGA 2028 0.4931 MNGGVELQVGDLFEEEEAVMAAVNERETWLQNYNKNGENDDDLLAGVLDDDASMFYNDDDDLNFHLLPDFPCMSSSSSSSSTPGPVKTVTCIPSSSFKTTSSSADCLTNPKSDAEDPVPPPPPPPPPPSASASALSSTASMEILQPPAHGGADVDGGDCLDMMDTFGYMELLESNDFFDPSSIFENDENPLEELQQLEQQQQELPPQMERGRDEELSSVFLEWLKTNKERVSASDLRSVRLKKATIESAANRLGGGKEGMRQLLKLILDWVQTSHLQNKRSRENHTNNDNNNNNNNNCNNYNYNYDLLTNQFQDDRYPSSNFYLNHQSSLGPEWISPSPYSADPAVPAPFPQVATSYNAGDPYPNGASSEFRMLESSHSWPHSDPFTVNVAPPPTATHYSNIFYPPPPYLCQFFQDSGGADGEMRLGPSATKEARKKRMARQRRCLSHHRRDNHHDQQNQEEHQTGAAHANPVNWLYWPPIMAASGGAGSVALVVPDEPPSGRHLDDRKGMQTHQNYQQSRVSSEKRQAEKNLRFLLQKVLKQSDKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYKDVKCGKFMIRGVKVRQAGAKPEKKKAGKSQKNQHGSDHHHAHASPSPFNTQTQKHEKNSQIQ 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0494 675 SUPERFAMILY DNA-binding pseudobarrel domain 537 621 IPR015300 -
Bisa06g0494 675 SMART B3_2 537 626 IPR003340 GO:0003677
Bisa06g0494 675 Gene3D - 533 643 IPR015300 -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 656 675 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 114 131 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 629 654 - -
Bisa06g0494 675 CDD BfiI_C_EcoRII_N_B3 535 625 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 278 300 - -
Bisa06g0494 675 ProSiteProfiles B3 DNA-binding domain profile. 563 628 IPR003340 GO:0003677
Bisa06g0494 675 MobiDBLite consensus disorder prediction 436 450 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 500 525 - -
Bisa06g0494 675 Coils Coil 526 546 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 94 137 - -
Bisa06g0494 675 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 209 652 IPR044800 GO:0003700
Bisa06g0494 675 MobiDBLite consensus disorder prediction 94 109 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 430 466 - -
Bisa06g0494 675 MobiDBLite consensus disorder prediction 629 675 - -
Bisa06g0494 675 Pfam B3 DNA binding domain 549 623 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0494 Bisa-ChrBisa06 12464269 12467162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0494 5 659 B3 DNA Binding Superfamily AT3G24650 42.954 5.10e-131 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa06g0494 B3 7.7e-11 CL0405